RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 DEFB103AP81534 67 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 LPAL2Q16609 132 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 AWAT2Q6E213 333 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.11□□□□□ -0.47
SCN8A-209ENST00000627620 CRB3Q9BUF7 120 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 STARD5Q9NSY2 213 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 A0A0A6YYC8 382 aaPredicted RBP12.11□□□□□ -0.47
SCN8A-209ENST00000627620 H3BQ06 376 aaPredicted RBP12.11□□□□□ -0.47
SCN8A-209ENST00000627620 I3L1I5 382 aaPredicted RBP12.11□□□□□ -0.47
SCN8A-209ENST00000627620 AKR1C4P17516 323 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 SDC1P18827 310 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 RNASE10Q5GAN6 216 aaKnown RBP12.11□□□□□ -0.47
SCN8A-209ENST00000627620 ABHD17BQ5VST6 288 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 PARS2Q7L3T8 475 aaKnown RBP12.11□□□□□ -0.47
SCN8A-209ENST00000627620 PRR22Q8IZ63 422 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 TMEM68Q96MH6 324 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 DNTTIP1Q9H147 329 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 UBE2J1Q9Y385 318 aaPredicted RBP12.11□□□□□ -0.47
SCN8A-209ENST00000627620 RPS17P08708 135 aaKnown RBP12.11□□□□□ -0.47
SCN8A-209ENST00000627620 TMEM225BP0DP42 221 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 IFNGR1P15260 489 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 SFTPDP35247 375 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 LSSP48449 732 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 ZNF140P52738 457 aaPredicted RBP12.11□□□□□ -0.47
SCN8A-209ENST00000627620 CDK3Q00526 305 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 MFSD13AQ14CX5 517 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 ARFGAP1Q8N6T3 406 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 RBM24Q9BX46 236 aaKnown RBP12.11□□□□□ -0.47
SCN8A-209ENST00000627620 NELFAQ9H3P2 528 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 FAM53CQ9NYF3 392 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 TAS2R3Q9NYW6 316 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 TMEM189-UBE2V1I3L0A0 370 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 MS4A2Q01362 244 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 KIR2DS3Q14952 304 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 PRAMEF8Q5VWM4 474 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 PRAMEF7Q5VXH5 474 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 SFRP4Q6FHJ7 346 aaPredicted RBP12.11□□□□□ -0.47
SCN8A-209ENST00000627620 CCBE1Q6UXH8 406 aaPredicted RBP12.11□□□□□ -0.47
SCN8A-209ENST00000627620 SLC35F2Q8IXU6 374 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 BEST3Q8N1M1 668 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 OR52E1Q8NGJ3 308 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 DTD2Q96FN9 168 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 TBCCD1Q9NVR7 557 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 UBQLN2Q9UHD9 624 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 H3BML4 177 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 SYT7O43581 403 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 PCGF2P35227 344 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 SOX3P41225 446 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 BMXP51813 675 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 LIPIQ6XZB0 460 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 CPOQ8IVL8 374 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 ELMOD2Q8IZ81 293 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 VWA5B2Q8N398 1253 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 ZFAND2BQ8WV99 257 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 HHIPQ96QV1 700 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 PINK1Q9BXM7 581 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 MEPEQ9NQ76 525 aaPredicted RBP12.1□□□□□ -0.47
SCN8A-209ENST00000627620 KCNIP1Q9NZI2 227 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 REV1Q9UBZ9 1251 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 CREBL2O60519 120 aaPredicted RBP12.1□□□□□ -0.47
SCN8A-209ENST00000627620 FOSL2P15408 326 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 TUBG1P23258 451 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 CD40LGP29965 261 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 PRDX3P30048 256 aaKnown RBP12.1□□□□□ -0.47
SCN8A-209ENST00000627620 PXNP49023 591 aaPredicted RBP12.1□□□□□ -0.47
SCN8A-209ENST00000627620 HES5Q5TA89 166 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 METTL2BQ6P1Q9 378 aaKnown RBP12.1□□□□□ -0.47
SCN8A-209ENST00000627620 ACOT4Q8N9L9 421 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 CYB561A3Q8NBI2 242 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 LMF1Q96S06 567 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 MACROD1Q9BQ69 325 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 SLC46A2Q9BY10 475 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 CD93Q9NPY3 652 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.1□□□□□ -0.47
SCN8A-209ENST00000627620 BRINP1O60477 761 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 TIMP2P16035 220 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 DCTP40126 519 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 NADSYN1Q6IA69 706 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 OR5D16Q8NGK9 328 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 TMEM45AQ9NWC5 275 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 MAGED1Q9Y5V3 778 aaPredicted RBP12.1□□□□□ -0.47
SCN8A-209ENST00000627620 PDE4DIPQ5VU43 2346 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 CNOT4O95628 575 aaKnown RBP12.1□□□□□ -0.47
SCN8A-209ENST00000627620 EDN1P05305 212 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 DHRS4L1P0CG22 281 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 PNMTP11086 282 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 PNCKQ6P2M8 343 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 ASRGL1Q7L266 308 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 MAELQ96JY0 434 aaKnown RBP12.1□□□□□ -0.47
SCN8A-209ENST00000627620 PRSS21Q9Y6M0 314 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 EEF1E1-BLOC1S5C9J1V9 151 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 FRS3O43559 492 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 PABPC4LP0CB38 370 aaKnown RBP12.1□□□□□ -0.47
SCN8A-209ENST00000627620 SLC2A5P22732 501 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 GJA5P36382 358 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 CTSCP53634 463 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 VEZF1Q14119 521 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 MPP7Q5T2T1 576 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 CPZQ66K79 652 aa12.1□□□□□ -0.47
SCN8A-209ENST00000627620 B3GNT9Q6UX72 402 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms