RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 RAB11FIP2Q7L804 512 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 WDR53Q7Z5U6 358 aaPredicted RBP7□□□□□ -1.29
PTP4A1-206ENST00000627002 ANKRD37Q7Z713 158 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 CARM1Q86X55 608 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 EPHX4Q8IUS5 362 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 PRSS58Q8IYP2 241 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 ZNF619Q8N2I2 560 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 GPR32P1Q8NGA4 272 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 OR52P1PQ8NH57 321 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 C16orf52Q8NHV5 167 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 SLC2A12Q8TD20 617 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 DOK4Q8TEW6 326 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 ZNF721Q8TF20 911 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 APOBEC4Q8WW27 367 aaKnown RBP7□□□□□ -1.29
PTP4A1-206ENST00000627002 OIT3Q8WWZ8 545 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 PIK3R3Q92569 461 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 NR4A3Q92570 626 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 RDH12Q96NR8 316 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 ZNF300Q96RE9 604 aaPredicted RBP7□□□□□ -1.29
PTP4A1-206ENST00000627002 TAAR9Q96RI9 348 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 PIP5K1AQ99755 562 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 RBM4BQ9BQ04 359 aaKnown RBP7□□□□□ -1.29
PTP4A1-206ENST00000627002 RBM4Q9BWF3 364 aaKnown RBP7□□□□□ -1.29
PTP4A1-206ENST00000627002 OR8D2Q9GZM6 311 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 SOX17Q9H6I2 414 aaPredicted RBP7□□□□□ -1.29
PTP4A1-206ENST00000627002 KLHL28Q9NXS3 571 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 C3orf18Q9UK00 162 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 MRTO4Q9UKD2 239 aaKnown RBP7□□□□□ -1.29
PTP4A1-206ENST00000627002 RAB26Q9ULW5 256 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 LRCH1Q9Y2L9 728 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 SAMHD1Q9Y3Z3 626 aaKnown RBP7□□□□□ -1.29
PTP4A1-206ENST00000627002 OR10H1Q9Y4A9 318 aa7□□□□□ -1.29
PTP4A1-206ENST00000627002 ADAMTS20P59510 1910 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 GXYLT2A0PJZ3 443 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 DCDC2BA2VCK2 349 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 FRG2CA6NGY1 282 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 AGAP5A6NIR3 686 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 SAGE2PA6NJ88 616 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 PDLIM1O00151 329 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 TNFRSF11BO00300 401 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 EI24O14681 340 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 PLD2O14939 933 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 FCMRO60667 390 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 NME6O75414 186 aaPredicted RBP6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 CLPSP04118 112 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 ADRB1P08588 477 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 CCNYL3P0C7X3 344 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 NID1P14543 1247 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 IL7RP16871 459 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 ZNF28P17035 718 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 TNFRSF1BP20333 461 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 DRD5P21918 477 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 RPS4Y1P22090 263 aaKnown RBP6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 RRM2P31350 389 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 SLC5A2P31639 672 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 DCTP40126 519 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 PPICP45877 212 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 EFNA3P52797 238 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 LIMK1P53667 647 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 PSG6Q00889 435 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 SPIBQ01892 262 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 EPS8Q12929 822 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 DAG1Q14118 895 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 GPR68Q15743 365 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 NRF1Q16656 503 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 DECR1Q16698 335 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 RFX4Q33E94 735 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 FLYWCH1Q4VC44 716 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 OTUD3Q5T2D3 398 aaPredicted RBP6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 SWT1Q5T5J6 900 aaKnown RBP6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 TMEM164Q5U3C3 297 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 HLA-DQA1Q5Y7H0 255 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 MRPL14Q6P1L8 145 aaKnown RBP6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 FIGNL1Q6PIW4 674 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 TMEM205Q6UW68 189 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 NPSR1Q6W5P4 371 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 ZNF517Q6ZMY9 492 aaPredicted RBP6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 SHISA6Q6ZSJ9 500 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 SLC29A4Q7RTT9 530 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 STK32CQ86UX6 486 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 CACTIN-AS1Q8N1I8 211 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 PIK3C3Q8NEB9 887 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 C17orf47Q8NEP4 570 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 OR1N1Q8NGS0 311 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 WDR36Q8NI36 951 aaKnown RBP6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 MR1Q95460 341 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 RMND5BQ96G75 393 aaPredicted RBP6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 NAF1Q96HR8 494 aaKnown RBP6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 SPSB2Q99619 263 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 SLC29A1Q99808 456 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 ARHGDIGQ99819 225 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 CRB3Q9BUF7 120 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 OSBPL11Q9BXB4 747 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 ITPAQ9BY32 194 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 AMBRA1Q9C0C7 1298 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 B3GNT4Q9C0J1 378 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 GABARAPL1Q9H0R8 117 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 TOR4AQ9NXH8 423 aa6.99□□□□□ -1.29
PTP4A1-206ENST00000627002 USE1Q9NZ43 259 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms