RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 RHAGQ02094 409 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 PIN1Q13526 163 aaPredicted RBP19.93■□□□□ 0.78
SPAST-204ENST00000621856 NPTX1Q15818 432 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 EIPR1Q53HC9 387 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 DCST1Q5T197 706 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 SLITRK4Q8IW52 837 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 CLIP4Q8N3C7 705 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 C7orf57Q8NEG2 295 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 OR7G1Q8NGA0 311 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 PSD2Q9BQI7 771 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 MRPS26Q9BYN8 205 aaKnown RBP19.93■□□□□ 0.78
SPAST-204ENST00000621856 SIDT1Q9NXL6 827 aaKnown RBP19.93■□□□□ 0.78
SPAST-204ENST00000621856 DTX4Q9Y2E6 619 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 POFUT2Q9Y2G5 429 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 PCDHGB2Q9Y5G2 931 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 FER1L5A0AVI2 2057 aa19.92■□□□□ 0.78
SPAST-204ENST00000621856 A6NHS1 94 aa19.92■□□□□ 0.78
SPAST-204ENST00000621856 KCNK2O95069 426 aa19.92■□□□□ 0.78
SPAST-204ENST00000621856 TIAF1O95411 115 aa19.92■□□□□ 0.78
SPAST-204ENST00000621856 ELAVL4P26378 380 aaKnown RBP19.92■□□□□ 0.78
SPAST-204ENST00000621856 CSTF2P33240 577 aaKnown RBP eCLIP19.92■□□□□ 0.78
SPAST-204ENST00000621856 RGS8P57771 180 aaPredicted RBP19.92■□□□□ 0.78
SPAST-204ENST00000621856 IL18R1Q13478 541 aa19.92■□□□□ 0.78
SPAST-204ENST00000621856 LIN52Q52LA3 116 aa19.92■□□□□ 0.78
SPAST-204ENST00000621856 ZNF691Q5VV52 312 aa19.92■□□□□ 0.78
SPAST-204ENST00000621856 C16orf52Q8NHV5 167 aa19.92■□□□□ 0.78
SPAST-204ENST00000621856 PTPMT1Q8WUK0 201 aaPredicted RBP19.92■□□□□ 0.78
SPAST-204ENST00000621856 ATOH1Q92858 354 aaPredicted RBP19.92■□□□□ 0.78
SPAST-204ENST00000621856 Q9N2J8 555 aa19.92■□□□□ 0.78
SPAST-204ENST00000621856 CTPS2Q9NRF8 586 aa19.92■□□□□ 0.78
SPAST-204ENST00000621856 PRODH2Q9UF12 536 aa19.92■□□□□ 0.78
SPAST-204ENST00000621856 CHST2Q9Y4C5 530 aa19.92■□□□□ 0.78
SPAST-204ENST00000621856 CENPVL1A0A0U1RR11 272 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 ARRDC5A6NEK1 342 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 FAAHO00519 579 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 NTN3O00634 580 aaPredicted RBP19.91■□□□□ 0.78
SPAST-204ENST00000621856 BRINP1O60477 761 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 CCNYL3P0C7X3 344 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 ATP6V1B1P15313 513 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 RPS4Y1P22090 263 aaKnown RBP19.91■□□□□ 0.78
SPAST-204ENST00000621856 TRHRP34981 398 aaPredicted RBP19.91■□□□□ 0.78
SPAST-204ENST00000621856 CLK3P49761 638 aaKnown RBP19.91■□□□□ 0.78
SPAST-204ENST00000621856 TAS2R41P59536 307 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 KCTD21Q4G0X4 260 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 PWWP2BQ6NUJ5 590 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 COX15Q7KZN9 410 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 PPP1R3BQ86XI6 285 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 ZNF615Q8N8J6 731 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 AQP11Q8NBQ7 271 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 SETD9Q8NE22 299 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 TSPAN14Q8NG11 270 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 RHBDD1Q8TEB9 315 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 NR4A3Q92570 626 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 NIPSNAP1Q9BPW8 284 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 GRIP2Q9C0E4 1043 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 CTSFQ9UBX1 484 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 MKL2Q9ULH7 1088 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 GMPPBQ9Y5P6 360 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 CLCA3PQ9Y6N3 262 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 SEC16AO15027 2179 aa19.91■□□□□ 0.78
SPAST-204ENST00000621856 PEX12O00623 359 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 AP3D1O14617 1153 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 OXSR1O95747 527 aaPredicted RBP19.9■□□□□ 0.78
SPAST-204ENST00000621856 CBLP22681 906 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 EEF1A1P68104 462 aaKnown RBP19.9■□□□□ 0.78
SPAST-204ENST00000621856 NPRL3Q12980 569 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 KEAP1Q14145 624 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 NSDHLQ15738 373 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 MAPK14Q16539 360 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 FLYWCH1Q4VC44 716 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 NPSR1Q6W5P4 371 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 PMM1Q92871 262 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 GTPBP3Q969Y2 492 aaKnown RBP19.9■□□□□ 0.78
SPAST-204ENST00000621856 SENP5Q96HI0 755 aaPredicted RBP19.9■□□□□ 0.78
SPAST-204ENST00000621856 ITPAQ9BY32 194 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 GABARAPL3Q9BY60 117 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 OCIAD1Q9NX40 245 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 OR10H1Q9Y4A9 318 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 PCDHGA8Q9Y5G5 932 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 TCRBV16S1A1N1A0A5B0 115 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 LNP1A1A4G5 178 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 FAM86C2PA6NEL3 165 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 TTC36A6NLP5 189 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 CLDN24A6NM45 220 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 EFCAB7A8K855 629 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 FLRT2O43155 660 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 TPST2O60704 377 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 CLPTM1O96005 669 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 CLPSP04118 112 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 HBQ1P09105 142 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 POU2F1P14859 743 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 IFNA8P32881 189 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 RPS6KA3P51812 740 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 IL5RAQ01344 420 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 TRA2AQ13595 282 aaKnown RBP eCLIP19.9■□□□□ 0.78
SPAST-204ENST00000621856 RAPSNQ13702 412 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 ELAVL1Q15717 326 aaKnown RBP19.9■□□□□ 0.78
SPAST-204ENST00000621856 NNATQ16517 81 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 NKAIN1Q4KMZ8 207 aa19.9■□□□□ 0.78
SPAST-204ENST00000621856 PLA2G2CQ5R387 149 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms