RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 TMEM52Q8NDY8 209 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 GAB3Q8WWW8 586 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 NAA50Q9GZZ1 169 aaKnown RBP14.67□□□□□ -0.06
CPSF1-213ENST00000620219 OR51V1Q9H2C8 321 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 TMEM221A6NGB7 291 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 M0R296 226 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 TFPTP0C1Z6 253 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 TFPIP10646 304 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 EPHA8P29322 1005 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-213ENST00000620219 CACTIN-AS1Q8N1I8 211 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 SVOPQ8N4V2 548 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 SENP5Q96HI0 755 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-213ENST00000620219 IFT27Q9BW83 186 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 TSSK6Q9BXA6 273 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 PLXNA2O75051 1894 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 SLC1A7O00341 560 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 TRMUO75648 421 aaKnown RBP14.66□□□□□ -0.06
CPSF1-213ENST00000620219 GTF2E2P29084 291 aaKnown RBP14.66□□□□□ -0.06
CPSF1-213ENST00000620219 PLCXD2Q0VAA5 305 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 SERTAD2Q14140 314 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 GINS1Q14691 196 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 KCTD21Q4G0X4 260 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 OR5M10Q6IEU7 315 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 SHISA5Q8N114 240 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 VMP1Q96GC9 406 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 MBOAT4Q96T53 435 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 CD180Q99467 661 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 SYNPO2LQ9H987 977 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 TSC22D4Q9Y3Q8 395 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 A0A1W2PPW3 197 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 FAM86C2PA6NEL3 165 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 MYL12BO14950 172 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 SLC35E2P0CK97 266 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 SLC9A3P48764 834 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 ADARB1P78563 741 aaKnown RBP14.66□□□□□ -0.06
CPSF1-213ENST00000620219 PCDH1Q08174 1060 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 BIKQ13323 160 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 CHDHQ8NE62 594 aaPredicted RBP14.66□□□□□ -0.06
CPSF1-213ENST00000620219 SLC25A36Q96CQ1 311 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 MFN2O95140 757 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 FUT4P22083 530 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 ADPRMQ3LIE5 342 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 MANEAQ5SRI9 462 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 MRPL2Q5T653 305 aaKnown RBP14.66□□□□□ -0.06
CPSF1-213ENST00000620219 ADCK1Q86TW2 530 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 WDR36Q8NI36 951 aaKnown RBP14.66□□□□□ -0.06
CPSF1-213ENST00000620219 AICDAQ9GZX7 198 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 OR10A5Q9H207 317 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 A4GALTQ9NPC4 353 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 SLC7A7Q9UM01 511 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 COL4A3Q01955 1670 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 OR6A2O95222 327 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 NSA2O95478 260 aaKnown RBP14.66□□□□□ -0.06
CPSF1-213ENST00000620219 HPRP00739 348 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 HIST1H2ABP04908 130 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 MYL12AP19105 171 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 RORAP35398 523 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 KCNJ5P48544 419 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 EMP2P54851 167 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 CTU2Q2VPK5 515 aaKnown RBP14.66□□□□□ -0.06
CPSF1-213ENST00000620219 HIST3H2AQ7L7L0 130 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 GOT1L1Q8NHS2 421 aaPredicted RBP14.66□□□□□ -0.06
CPSF1-213ENST00000620219 HIST1H2ACQ93077 130 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 CFL2Q9Y281 166 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 THADAQ6YHU6 1953 aa14.66□□□□□ -0.06
CPSF1-213ENST00000620219 CEP250Q9BV73 2442 aa14.65□□□□□ -0.06
CPSF1-213ENST00000620219 ELOA3DA6NLF2 546 aaPredicted RBP14.65□□□□□ -0.06
CPSF1-213ENST00000620219 DBIP07108 87 aaKnown RBP14.65□□□□□ -0.06
CPSF1-213ENST00000620219 NRG3P56975 720 aa14.65□□□□□ -0.06
CPSF1-213ENST00000620219 ELOA3BQ3SY89 546 aa14.65□□□□□ -0.06
CPSF1-213ENST00000620219 PODNL1Q6PEZ8 512 aa14.65□□□□□ -0.06
CPSF1-213ENST00000620219 FAM98AQ8NCA5 519 aaKnown RBP14.65□□□□□ -0.06
CPSF1-213ENST00000620219 ELOA3Q8NG57 546 aa14.65□□□□□ -0.06
CPSF1-213ENST00000620219 MYDGFQ969H8 173 aa14.65□□□□□ -0.06
CPSF1-213ENST00000620219 TP53INP1Q96A56 240 aa14.65□□□□□ -0.06
CPSF1-213ENST00000620219 TOR4AQ9NXH8 423 aa14.65□□□□□ -0.06
CPSF1-213ENST00000620219 TAS2R7Q9NYW3 318 aa14.65□□□□□ -0.06
CPSF1-213ENST00000620219 C2orf92A0A1B0GVN3 265 aa14.65□□□□□ -0.06
CPSF1-213ENST00000620219 HRO43593 1189 aa14.65□□□□□ -0.06
CPSF1-213ENST00000620219 LDOC1O95751 146 aaPredicted RBP14.65□□□□□ -0.06
CPSF1-213ENST00000620219 CLK3P49761 638 aaKnown RBP14.65□□□□□ -0.06
CPSF1-213ENST00000620219 ZNF619Q8N2I2 560 aa14.65□□□□□ -0.06
CPSF1-213ENST00000620219 CLIP4Q8N3C7 705 aa14.65□□□□□ -0.06
CPSF1-213ENST00000620219 OR4N2Q8NGD1 307 aa14.65□□□□□ -0.06
CPSF1-213ENST00000620219 OR1L3Q8NH93 324 aa14.65□□□□□ -0.06
CPSF1-213ENST00000620219 C12orf43Q96C57 262 aaKnown RBP14.65□□□□□ -0.06
CPSF1-213ENST00000620219 SPTBN5Q9NRC6 3674 aaKnown RBP14.65□□□□□ -0.06
CPSF1-213ENST00000620219 PLXND1Q9Y4D7 1925 aa14.65□□□□□ -0.06
CPSF1-213ENST00000620219 SDK2Q58EX2 2172 aa14.65□□□□□ -0.06
CPSF1-213ENST00000620219 SHISA7A6NL88 538 aa14.65□□□□□ -0.06
CPSF1-213ENST00000620219 IGLV3-19P01714 112 aa14.65□□□□□ -0.06
CPSF1-213ENST00000620219 CNR2P34972 360 aa14.65□□□□□ -0.06
CPSF1-213ENST00000620219 CDK5R2Q13319 367 aa14.65□□□□□ -0.06
CPSF1-213ENST00000620219 MRM1Q6IN84 353 aaKnown RBP14.65□□□□□ -0.06
CPSF1-213ENST00000620219 GPR52Q9Y2T5 361 aa14.65□□□□□ -0.06
CPSF1-213ENST00000620219 TPRP12270 2363 aaKnown RBP14.65□□□□□ -0.06
CPSF1-213ENST00000620219 TTC36A6NLP5 189 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 GASTP01350 101 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 C7P10643 843 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 ZNF527Q8NB42 609 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms