RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 EXOSC6Q5RKV6 272 aaKnown RBP10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ATAT1Q5SQI0 421 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 BCL2L15Q5TBC7 163 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TNFAIP8L2Q6P589 184 aaPredicted RBP10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ABHD17CQ6PCB6 329 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 LHFPL3Q86UP9 236 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 Q8N402 240 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 HDDC3Q8N4P3 179 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 UXS1Q8NBZ7 420 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 OR2L5Q8NG80 312 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TMEM19Q96HH6 336 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TBX5Q99593 518 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SLC35C2Q9NQQ7 365 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TM7SF3Q9NS93 570 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 MRPS18AQ9NVS2 196 aaKnown RBP10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CLN6Q9NWW5 311 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 LYARQ9NX58 379 aaKnown RBP10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 OR6C2Q9NZP2 312 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 MRPL15Q9P015 296 aaKnown RBP10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 PLAGL1Q9UM63 463 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 LRP4O75096 1905 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 H7BY64 318 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 HPGDSO60760 199 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 UBL4AP11441 157 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ETV6P41212 452 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ARHGDIBP52566 201 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 BTN1A1Q13410 526 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SSX1Q16384 188 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 GRAMD2AQ8IUY3 354 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 FAM46DQ8NEK8 389 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 OR56A1Q8NGH5 318 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TM4SF19Q96DZ7 209 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 PRAP1Q96NZ9 151 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 FERD3LQ96RJ6 166 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 APOOQ9BUR5 198 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SLC17A9Q9BYT1 436 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 GLIPR2Q9H4G4 154 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ING3Q9NXR8 418 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CMAHPQ9Y471 501 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ATP6V1G2-DDX39BF2Z307 99 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TNFRSF10CO14798 259 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 FABP7O15540 132 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 GASTP01350 101 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CSF3P09919 207 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SMIM10L1P0DMW3 83 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CD72P21854 359 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ELAVL4P26378 380 aaKnown RBP10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 KHKP50053 298 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 RHAGQ02094 409 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 RPS26P11Q5JNZ5 115 aaPredicted RBP10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 GET4Q7L5D6 327 aaPredicted RBP10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 OR2L3Q8NG85 312 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SMIM10Q96HG1 83 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 DPH7Q9BTV6 452 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 S1PR5Q9H228 398 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 NMNAT1Q9HAN9 279 aaPredicted RBP10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SLC6A20Q9NP91 592 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SEMA3GQ9NS98 782 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 PPIEQ9UNP9 301 aaKnown RBP10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 PRAMEF27A3QJZ7 478 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SEMA7AO75326 666 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 PROS1P07225 676 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 GUSBP08236 651 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 PRKACAP17612 351 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 HIST1H1TP22492 207 aaPredicted RBP10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 IGFALSP35858 605 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 BCL6P41182 706 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ZNF81P51508 661 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SLC9A5Q14940 896 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 NCF4Q15080 339 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 GPR68Q15743 365 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 RPE65Q16518 533 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ENTPD8Q5MY95 495 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ZNF793Q6ZN11 406 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CCDC190Q86UF4 302 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 YAF2Q8IY57 180 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 MMP21Q8N119 569 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 GJD3Q8N144 294 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 HMGB4Q8WW32 186 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 RAB8BQ92930 207 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 C12orf66Q96MD2 445 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TAPBPLQ9BX59 468 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 PINK1Q9BXM7 581 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 POLR2J3Q9H1A7 115 aaKnown RBP10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ZDHHC4Q9NPG8 344 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SERGEFQ9UGK8 458 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TMCC3Q9ULS5 477 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 A4GNTQ9UNA3 340 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CFAP20Q9Y6A4 193 aaKnown RBP10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 COLEC10Q9Y6Z7 277 aa10.18□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 A0A1W2PPK0 400 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 WASHC1A8K0Z3 465 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 OR1F1O43749 312 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 APBB3O95704 486 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 LGI1O95970 557 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ENPP1P22413 925 aa10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ATP5A1P25705 553 aaKnown RBP10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 PEBP1P30086 187 aaKnown RBP10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 MLLT1Q03111 559 aaPredicted RBP10.17□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms