RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 OR10H1Q9Y4A9 318 aa15.42■□□□□ 0.06
CSNK1E-215ENST00000612795 MAGED1Q9Y5V3 778 aaPredicted RBP15.42■□□□□ 0.06
CSNK1E-215ENST00000612795 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.42■□□□□ 0.065e-7■■□□□ 12.3
CSNK1E-215ENST00000612795 TCRBV9S1A1TA0A576 114 aa15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 NME6O75414 186 aaPredicted RBP15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 BCAS2O75934 225 aaPredicted RBP15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 IGHV4-39P01824 125 aa15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 CD3EP07766 207 aa15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 CRABP2P29373 138 aa15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 EIF1AXP47813 144 aaKnown RBP15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 GRTP1Q5TC63 336 aa15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 ADAM5Q6NVV9 412 aa15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 NPSR1Q6W5P4 371 aa15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 COMMD6Q7Z4G1 85 aa15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 GAS2L3Q86XJ1 694 aa15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 SLC35F6Q8N357 371 aa15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 METTL4Q8N3J2 472 aa15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 RHEBL1Q8TAI7 183 aa15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 TRPC4APQ8TEL6 797 aa15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 SMAP2Q8WU79 429 aaPredicted RBP15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 RNF138Q8WVD3 245 aa15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 KCTD4Q8WVF5 259 aa15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 GMPPAQ96IJ6 420 aaPredicted RBP15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 FAIM2Q9BWQ8 316 aa15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 OR10A4Q9H209 315 aa15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 ANKRA2Q9H9E1 313 aa15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 ZBTB26Q9HCK0 441 aa15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 SDHAF3Q9NRP4 125 aa15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 CPSF2Q9P2I0 782 aaKnown RBP15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 GPR52Q9Y2T5 361 aa15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 ACOT9Q9Y305 439 aa15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 TNPO3Q9Y5L0 923 aaKnown RBP15.41■□□□□ 0.06
CSNK1E-215ENST00000612795 FAM159BA6NKW6 160 aa15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 EIF1AYO14602 144 aaKnown RBP15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 TP73O15350 636 aa15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 SS18L1O75177 396 aaPredicted RBP15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 SIX3O95343 332 aaPredicted RBP15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 ESRRBO95718 433 aa15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 DANCRP0C864 163 aa15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 CCNG1P51959 295 aa15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 ZNF844Q08AG5 666 aa15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 IFT88Q13099 833 aa15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 CTU2Q2VPK5 515 aaKnown RBP15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 ZNF675Q8TD23 568 aa15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 CNRIP1Q96F85 164 aaPredicted RBP15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 VSTM2LQ96N03 204 aa15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 ALG2Q9H553 416 aa15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 ESRP2Q9H6T0 727 aaKnown RBP15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 NOL11Q9H8H0 719 aaKnown RBP15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 FOLH1BQ9HBA9 442 aa15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 BARX1Q9HBU1 254 aaPredicted RBP15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 SAYSD1Q9NPB0 183 aa15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 STOML1Q9UBI4 398 aa15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 UTS2RQ9UKP6 389 aa15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 SLC12A4Q9UP95 1085 aa15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 AP4B1Q9Y6B7 739 aa15.4■□□□□ 0.06
CSNK1E-215ENST00000612795 SLC6A8P48029 635 aa15.39■□□□□ 0.05
CSNK1E-215ENST00000612795 IRF9Q00978 393 aa15.39■□□□□ 0.05
CSNK1E-215ENST00000612795 FAM83EQ2M2I3 478 aa15.39■□□□□ 0.05
CSNK1E-215ENST00000612795 ZNF628Q5EBL2 1059 aa15.39■□□□□ 0.05
CSNK1E-215ENST00000612795 SGO1Q5FBB7 561 aa15.39■□□□□ 0.05
CSNK1E-215ENST00000612795 SLC44A2Q8IWA5 706 aaPredicted RBP15.39■□□□□ 0.05
CSNK1E-215ENST00000612795 LRRC8AQ8IWT6 810 aa15.39■□□□□ 0.05
CSNK1E-215ENST00000612795 PPM1NQ8N819 430 aa15.39■□□□□ 0.05
CSNK1E-215ENST00000612795 OR52B6Q8NGF0 335 aa15.39■□□□□ 0.05
CSNK1E-215ENST00000612795 LILRB1Q8NHL6 650 aaPredicted RBP15.39■□□□□ 0.05
CSNK1E-215ENST00000612795 UHMK1Q8TAS1 419 aaKnown RBP15.39■□□□□ 0.05
CSNK1E-215ENST00000612795 KAT2AQ92830 837 aa15.39■□□□□ 0.05
CSNK1E-215ENST00000612795 S100PBPQ96BU1 408 aa15.39■□□□□ 0.05
CSNK1E-215ENST00000612795 C1GALT1C1Q96EU7 318 aa15.39■□□□□ 0.05
CSNK1E-215ENST00000612795 C19orf24Q9BVV8 132 aa15.39■□□□□ 0.05
CSNK1E-215ENST00000612795 BEX2Q9BXY8 128 aa15.39■□□□□ 0.05
CSNK1E-215ENST00000612795 ELOVL6Q9H5J4 265 aa15.39■□□□□ 0.05
CSNK1E-215ENST00000612795 C12orf49Q9H741 205 aa15.39■□□□□ 0.05
CSNK1E-215ENST00000612795 NGBQ9NPG2 151 aa15.39■□□□□ 0.05
CSNK1E-215ENST00000612795 SENP1Q9P0U3 644 aa15.39■□□□□ 0.05
CSNK1E-215ENST00000612795 MCTS1Q9ULC4 181 aaKnown RBP15.39■□□□□ 0.05
CSNK1E-215ENST00000612795 OR7A17O14581 309 aa15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 GPRIN2O60269 458 aa15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 NDUFS7O75251 213 aa15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 PSMB1P20618 241 aaKnown RBP15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 ZNF155Q12901 538 aaPredicted RBP15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 SH2D4BQ5SQS7 431 aa15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 NCMAPQ5T1S8 102 aa15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 LGSNQ5TDP6 509 aa15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 KLC3Q6P597 504 aa15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 DNM1P46Q6ZS02 220 aa15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 GGNQ86UU5 652 aa15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 CCDC116Q8IYX3 515 aa15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 CENPLQ8N0S6 344 aaPredicted RBP15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 STEAP2Q8NFT2 490 aa15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 OR4N2Q8NGD1 307 aa15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 OR9A2Q8NGT5 310 aa15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 NEUROG1Q92886 237 aa15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 TM4SF18Q96CE8 201 aa15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 ERP27Q96DN0 273 aa15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 ZNF681Q96N22 645 aa15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 KCNK17Q96T54 332 aa15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 RHNO1Q9BSD3 238 aa15.38■□□□□ 0.05
CSNK1E-215ENST00000612795 LRTM1Q9HBL6 345 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms