RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 MGLLQ99685 303 aa12.71□□□□□ -0.38
NEK3-205ENST00000610828 TSSK6Q9BXA6 273 aa12.71□□□□□ -0.38
NEK3-205ENST00000610828 OR51E2Q9H255 320 aa12.71□□□□□ -0.38
NEK3-205ENST00000610828 ANKHQ9HCJ1 492 aa12.71□□□□□ -0.38
NEK3-205ENST00000610828 HMG20AQ9NP66 347 aa12.71□□□□□ -0.38
NEK3-205ENST00000610828 RPL36Q9Y3U8 105 aaKnown RBP12.71□□□□□ -0.38
NEK3-205ENST00000610828 A0A087WV62 115 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 MAGEB3O15480 346 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 ZNF217O75362 1048 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 ALOX5P09917 674 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 CT62P0C5K7 136 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 DBTP11182 482 aaKnown RBP12.7□□□□□ -0.38
NEK3-205ENST00000610828 IDUAP35475 653 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 NUDT1P36639 197 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 PPM1FP49593 454 aaPredicted RBP12.7□□□□□ -0.38
NEK3-205ENST00000610828 SMSP52788 366 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 CDK5Q00535 292 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 SNAPC1Q16533 368 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 PRICKLE4Q2TBC4 344 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 DCST2Q5T1A1 773 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 COX18Q8N8Q8 333 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 C19orf47Q8N9M1 422 aaKnown RBP12.7□□□□□ -0.38
NEK3-205ENST00000610828 TEX47Q8TBZ9 253 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 GNPDA2Q8TDQ7 276 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 GPR151Q8TDV0 419 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 ABTB1Q969K4 478 aaPredicted RBP12.7□□□□□ -0.38
NEK3-205ENST00000610828 LRR1Q96L50 414 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 POLDIP3Q9BY77 421 aaKnown RBP12.7□□□□□ -0.38
NEK3-205ENST00000610828 RBCK1Q9BYM8 510 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 DSN1Q9H410 356 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 CAPN10Q9HC96 672 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 MAT2BQ9NZL9 334 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 SLC9B1P1A6NJY1 282 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 CHURC1-FNTBB4DL54 471 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 PLOD3O60568 738 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 PFDN1O60925 122 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 STX11O75558 287 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 UBXN7O94888 489 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 RNF144AP50876 292 aaPredicted RBP12.7□□□□□ -0.38
NEK3-205ENST00000610828 MAP4K2Q12851 820 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 TSPAN31Q12999 210 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 DUSP8Q13202 625 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 ZNF846Q147U1 533 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 OCLNQ16625 522 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 MEDAGQ5VYS4 303 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 SLC34A3Q8N130 599 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 CDRT4Q8N9R6 151 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 PIGXQ8TBF5 258 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 SLC41A3Q96GZ6 507 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 TMEM80Q96HE8 168 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 SLIRPQ9GZT3 109 aaKnown RBP12.7□□□□□ -0.38
NEK3-205ENST00000610828 ZNF350Q9GZX5 532 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 ANKRD19PQ9H560 264 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 FBXO34Q9NWN3 711 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 OSGIN1Q9UJX0 560 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 DOLKQ9UPQ8 538 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 ERGIC3Q9Y282 383 aa12.7□□□□□ -0.38
NEK3-205ENST00000610828 TNRC18O15417 2968 aaPredicted RBP12.69□□□□□ -0.38
NEK3-205ENST00000610828 NPIPA5A0A0B4J1W7 369 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 AGAP5A6NIR3 686 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 NPIPA7E9PJI5 369 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 NPIPA8P0DM63 369 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 CKMT1AP12532 417 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 POU3F3P20264 500 aaPredicted RBP12.69□□□□□ -0.38
NEK3-205ENST00000610828 PTNP21246 168 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 MAOBP27338 520 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 RAB38P57729 211 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 MAPK14Q16539 360 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 TSTQ16762 297 aaKnown RBP12.69□□□□□ -0.38
NEK3-205ENST00000610828 SOWAHCQ53LP3 525 aaPredicted RBP12.69□□□□□ -0.38
NEK3-205ENST00000610828 SYT14P1Q58G82 188 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 CLEC12AQ5QGZ9 265 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 SLC27A4Q6P1M0 643 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 FIGNL1Q6PIW4 674 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 GDF7Q7Z4P5 450 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 BTLAQ7Z6A9 289 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 IGFN1Q86VF2 1251 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 ZNF619Q8N2I2 560 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 FAM26EQ8N5C1 309 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 ACOT11Q8WXI4 607 aaPredicted RBP12.69□□□□□ -0.38
NEK3-205ENST00000610828 ABHD8Q96I13 439 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 CHCHD6Q9BRQ6 235 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 RNF167Q9H6Y7 350 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 UBE2ZQ9H832 354 aaPredicted RBP12.69□□□□□ -0.38
NEK3-205ENST00000610828 PALMDQ9NP74 551 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 AKIP1Q9NQ31 210 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 DUSP22Q9NRW4 184 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 CLEC2DQ9UHP7 191 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 OR10H2O60403 315 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 THY1P04216 161 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 WNT1P04628 370 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 VCANP13611 3396 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 CSTF2P33240 577 aaKnown RBP eCLIP12.69□□□□□ -0.38
NEK3-205ENST00000610828 RANBP1P43487 201 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 OMPP47874 163 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 EEF1A1P68104 462 aaKnown RBP12.69□□□□□ -0.38
NEK3-205ENST00000610828 TUBA1BP68363 451 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 ITGADQ13349 1161 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 DOC2BQ14184 412 aa12.69□□□□□ -0.38
NEK3-205ENST00000610828 UBXN2BQ14CS0 331 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms