RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 MED12Q93074 2177 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 ANK2Q01484 3957 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 A0A087WZY1 265 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.67□□□□□ -1.5
CUX1-220ENST00000607092 STX16-NPEPL1H3BU86 382 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 STX16O14662 325 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 HS3ST1O14792 307 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 SIAH2O43255 324 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 PLOD3O60568 738 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 SMIM24O75264 130 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 PRKRAO75569 313 aaKnown RBP5.67□□□□□ -1.5
CUX1-220ENST00000607092 KLHL2O95198 593 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 SLU7O95391 586 aaKnown RBP5.67□□□□□ -1.5
CUX1-220ENST00000607092 SYNGR4O95473 234 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 ESRRBO95718 433 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 CBX7O95931 251 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 TGM6O95932 706 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 OTCP00480 354 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 KRT6AP02538 564 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 KRT6BP04259 564 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 CT62P0C5K7 136 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 MTHFD2P13995 350 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 HK1P19367 917 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 S1PR1P21453 382 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 ME2P23368 584 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 SSTR1P30872 391 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 CASQ1P31415 396 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 PHBP35232 272 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 FEN1P39748 380 aaKnown RBP5.67□□□□□ -1.5
CUX1-220ENST00000607092 KIR2DL2P43627 348 aaPredicted RBP5.67□□□□□ -1.5
CUX1-220ENST00000607092 KRT6CP48668 564 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 STARP49675 285 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 SERPINB8P50452 374 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 GPX6P59796 221 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 GNG11P61952 73 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 SIRPAP78324 504 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 VEZF1Q14119 521 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 FASTKD3Q14CZ7 662 aaKnown RBP5.67□□□□□ -1.5
CUX1-220ENST00000607092 NNATQ16517 81 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 DECR1Q16698 335 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 KCTD19Q17RG1 926 aaPredicted RBP5.67□□□□□ -1.5
CUX1-220ENST00000607092 TSNAXIP1Q2TAA8 658 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 CHRFAM7AQ494W8 412 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 VPS26BQ4G0F5 336 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 CYP27C1Q4G0S4 372 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 HMBOX1Q6NT76 420 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 ZNF474Q6S9Z5 364 aaPredicted RBP5.67□□□□□ -1.5
CUX1-220ENST00000607092 SYT10Q6XYQ8 523 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 LIAT1Q6ZQX7 453 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 COMMD6Q7Z4G1 85 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 GOLGA7Q7Z5G4 137 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 HIPK1Q86Z02 1210 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 WDR75Q8IWA0 830 aaKnown RBP5.67□□□□□ -1.5
CUX1-220ENST00000607092 UBQLNLQ8IYU4 475 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 CIARTQ8N365 385 aaPredicted RBP5.67□□□□□ -1.5
CUX1-220ENST00000607092 PPM1NQ8N819 430 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 OR52R1Q8NGF1 315 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 ROBO4Q8WZ75 1007 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 FBXW5Q969U6 566 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 TMBIM1Q969X1 311 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 REXO5Q96IC2 774 aaKnown RBP5.67□□□□□ -1.5
CUX1-220ENST00000607092 ERP44Q9BS26 406 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 G6PC3Q9BUM1 346 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 PINK1Q9BXM7 581 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 TRIM31Q9BZY9 425 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 AMBRA1Q9C0C7 1298 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 KLHL4Q9C0H6 718 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 TSPYL1Q9H0U9 437 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 OPN3Q9H1Y3 402 aaPredicted RBP5.67□□□□□ -1.5
CUX1-220ENST00000607092 GP6Q9HCN6 339 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 GALNT9Q9HCQ5 603 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 Q9N2J8 555 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 TIGARQ9NQ88 270 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 SMYD2Q9NRG4 433 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 PLSCR4Q9NRQ2 329 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 FAM120CQ9NX05 1096 aaKnown RBP5.67□□□□□ -1.5
CUX1-220ENST00000607092 EHD3Q9NZN3 535 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 LPAR3Q9UBY5 353 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 CDC42EP3Q9UKI2 254 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 UTS2RQ9UKP6 389 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 CES1P1Q9UKY3 287 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 SLC12A4Q9UP95 1085 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 STK38LQ9Y2H1 464 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 WBP11Q9Y2W2 641 aaKnown RBP5.67□□□□□ -1.5
CUX1-220ENST00000607092 PLLPQ9Y342 182 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 RNF11Q9Y3C5 154 aa5.67□□□□□ -1.5
CUX1-220ENST00000607092 MED12LQ86YW9 2145 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 A0A096LPK6 155 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 A6NJY4 79 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 CD5LO43866 347 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 ZIC3O60481 467 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 TSPAN2O60636 221 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 CGAP01215 116 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 GBAP04062 536 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 C8BP07358 591 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 TUBBP07437 444 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 IFI6P09912 130 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 COL6A2P12110 1019 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 BMP4P12644 408 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 ZNF17P17021 662 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms