RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 CIB4A0PJX0 185 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 PRSS37A4D1T9 235 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 GLTPD2A6NH11 291 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 METTL15A6NJ78 407 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 C1QTNF3-AMACRE9PGA6 284 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 M0R296 226 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 BTN3A3O00478 584 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 DHHO43323 396 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 PSTPIP1O43586 416 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 SNAI2O43623 268 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 FAM189A1O60320 539 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 GLRA3O75311 464 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 WBP4O75554 376 aaKnown RBP4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 MED6O75586 246 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 PGK1P00558 417 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 IFNA2P01563 188 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 IFNGP01579 166 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 MT-ND1P03886 318 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 HOXB7P09629 217 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 AKR1A1P14550 325 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 TPH1P17752 444 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 GLDCP23378 1020 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 ACVR2AP27037 513 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 FHITP49789 147 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 MAB21L1Q13394 359 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 ASAH1Q13510 395 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 GPR50Q13585 617 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 TFDP2Q14188 446 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 RNF212Q495C1 297 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 C2CD6Q53TS8 623 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 NAPRTQ6XQN6 538 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 GDF7Q7Z4P5 450 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 ZNF546Q86UE3 836 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 SLCO6A1Q86UG4 719 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 CILP2Q8IUL8 1156 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 CLEC10AQ8IUN9 316 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 FUNDC1Q8IVP5 155 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 ZFP82Q8N141 532 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 ZNF276Q8N554 614 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 EMC1Q8N766 993 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 PACRGLQ8N7B6 248 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 KBTBD8Q8NFY9 601 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 SPSB1Q96BD6 273 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 PPWD1Q96BP3 646 aaKnown RBP4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 FOXRED1Q96CU9 486 aaPredicted RBP4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 GLT1D1Q96MS3 346 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 TEFMQ96QE5 360 aaKnown RBP4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 INPP5KQ9BT40 448 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 NMUR2Q9GZQ4 415 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 UBQLN3Q9H347 655 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 GREM2Q9H772 168 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 LMAN1LQ9HAT1 526 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 PXMP2Q9NR77 195 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 ABCB10Q9NRK6 738 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 TMLHEQ9NVH6 421 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 DPP3Q9NY33 737 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 KLHL21Q9UJP4 597 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 TP53TG5Q9Y2B4 290 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 ADGRA2Q96PE1 1338 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 ANKRD36CQ5JPF3 1778 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 NID2Q14112 1375 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 MEIOCA2RUB1 952 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 METTL21EPA6NDL7 271 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 NEDD8-MDP1E9PL57 170 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 KLRC4-KLRK1H3BQV0 150 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 PHYHO14832 338 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 RAD17O75943 681 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 SRPRAP08240 638 aaKnown RBP4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 HCKP08631 526 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 ALPIP09923 528 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 ADRB3P13945 408 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 AOC1P19801 751 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 CNR1P21554 472 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 RPL21P46778 160 aaKnown RBP4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 CAPZBP47756 277 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 EMP2P54851 167 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 NRG3P56975 720 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 RGS8P57771 180 aaPredicted RBP4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 ERVK-25P63136 954 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 NHLH1Q02575 133 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 HEPACAMQ14CZ8 416 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 MICAQ29983 383 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 RFX4Q33E94 735 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 COQ5Q5HYK3 327 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 LRRC73Q5JTD7 316 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 SEL1L3Q68CR1 1132 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 C3P1Q6ZMU1 363 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 DPPA4Q7L190 304 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 ARCQ7LC44 396 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 TRIM69Q86WT6 500 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 TMEM123Q8N131 208 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 SVOPLQ8N434 492 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 WDSUB1Q8N9V3 476 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 REPS2Q8NFH8 660 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 SPPL2AQ8TCT8 520 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 ACOT11Q8WXI4 607 aaPredicted RBP4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 MCHR2Q969V1 340 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 HARBI1Q96MB7 349 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 CASD1Q96PB1 797 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 TSSK3Q96PN8 268 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms