RNA–Protein interactions for RNA: ENST00000598355.1

TRIM28-213, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-213ENST00000598355 ADGRG4Q8IZF6 3080 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 DOCK7Q96N67 2140 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 TRPC5OSA6NMA1 111 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 RNASET2O00584 256 aaKnown RBP14.72□□□□□ -0.05
TRIM28-213ENST00000598355 FADS1O60427 444 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 C6orf47O95873 294 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 IGKV1D-16P01601 117 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 TPOP07202 933 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 GDF1P27539 372 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 EVI2BP34910 448 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 MASP1P48740 699 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 MAN2A2P49641 1150 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 DECR1Q16698 335 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 DPY19L1Q2PZI1 675 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 VPS26BQ4G0F5 336 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 NHSL2Q5HYW2 709 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 ANGPTL8Q6UXH0 198 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 EID3Q8N140 333 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 MARVELD2Q8N4S9 558 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 SLC16A11Q8NCK7 471 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 OR1J4Q8NGS1 313 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 PIWIL2Q8TC59 973 aaKnown RBP14.72□□□□□ -0.05
TRIM28-213ENST00000598355 FAM110BQ8TC76 370 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 JSRP1Q96MG2 331 aaPredicted RBP14.72□□□□□ -0.05
TRIM28-213ENST00000598355 C7orf26Q96N11 449 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 EQTNQ9NQ60 294 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 DUSP22Q9NRW4 184 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 ZCCHC3Q9NUD5 404 aaKnown RBP14.72□□□□□ -0.05
TRIM28-213ENST00000598355 GPATCH2Q9NW75 528 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 FAM120CQ9NX05 1096 aaKnown RBP14.72□□□□□ -0.05
TRIM28-213ENST00000598355 MARCOQ9UEW3 520 aaPredicted RBP14.72□□□□□ -0.05
TRIM28-213ENST00000598355 CRYBG3Q68DQ2 2970 aa14.72□□□□□ -0.05
TRIM28-213ENST00000598355 HCFC1P51610 2035 aa14.71□□□□□ -0.05
TRIM28-213ENST00000598355 KIAA1549Q9HCM3 1950 aa14.71□□□□□ -0.05
TRIM28-213ENST00000598355 GXYLT2A0PJZ3 443 aa14.71□□□□□ -0.05
TRIM28-213ENST00000598355 NPIPA2E9PIF3 369 aa14.71□□□□□ -0.05
TRIM28-213ENST00000598355 NPIPA3F8WFD2 350 aa14.71□□□□□ -0.05
TRIM28-213ENST00000598355 HMGN2P05204 90 aaKnown RBP14.71□□□□□ -0.05
TRIM28-213ENST00000598355 NGFRP08138 427 aa14.71□□□□□ -0.05
TRIM28-213ENST00000598355 EPHA3P29320 983 aa14.71□□□□□ -0.05
TRIM28-213ENST00000598355 HBA1P69905 142 aa14.71□□□□□ -0.05
TRIM28-213ENST00000598355 PHC1P78364 1004 aa14.71□□□□□ -0.05
TRIM28-213ENST00000598355 CRYZQ08257 329 aaKnown RBP14.71□□□□□ -0.05
TRIM28-213ENST00000598355 DUSP5Q16690 384 aa14.71□□□□□ -0.05
TRIM28-213ENST00000598355 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.71□□□□□ -0.05
TRIM28-213ENST00000598355 LSM12Q3MHD2 195 aaKnown RBP14.71□□□□□ -0.05
TRIM28-213ENST00000598355 NCCRP1Q6ZVX7 275 aaPredicted RBP14.71□□□□□ -0.05
TRIM28-213ENST00000598355 SPATA19Q7Z5L4 167 aa14.71□□□□□ -0.05
TRIM28-213ENST00000598355 OR56A1Q8NGH5 318 aa14.71□□□□□ -0.05
TRIM28-213ENST00000598355 MOAP1Q96BY2 351 aa14.71□□□□□ -0.05
TRIM28-213ENST00000598355 SARAFQ96BY9 339 aa14.71□□□□□ -0.05
TRIM28-213ENST00000598355 STACQ99469 402 aa14.71□□□□□ -0.05
TRIM28-213ENST00000598355 DPY30Q9C005 99 aa14.71□□□□□ -0.05
TRIM28-213ENST00000598355 OR2B2Q9GZK3 357 aa14.71□□□□□ -0.05
TRIM28-213ENST00000598355 WDR55Q9H6Y2 383 aaPredicted RBP14.71□□□□□ -0.05
TRIM28-213ENST00000598355 PNPLA3Q9NST1 481 aa14.71□□□□□ -0.05
TRIM28-213ENST00000598355 FLRT3Q9NZU0 649 aa14.71□□□□□ -0.05
TRIM28-213ENST00000598355 MRTO4Q9UKD2 239 aaKnown RBP14.71□□□□□ -0.05
TRIM28-213ENST00000598355 GPR45Q9Y5Y3 372 aa14.71□□□□□ -0.05
TRIM28-213ENST00000598355 INTS1Q8N201 2190 aaKnown RBP14.7□□□□□ -0.06
TRIM28-213ENST00000598355 A1L4Q6 167 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 FIGNL2A6NMB9 653 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 E9PBE3 544 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 GNB5O14775 395 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 CBR3O75828 277 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 LCN1P31025 176 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 GABRA3P34903 492 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 KIR3DL1P43629 444 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 PRIM2P49643 509 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 CLNS1AP54105 237 aaKnown RBP14.7□□□□□ -0.06
TRIM28-213ENST00000598355 PSMD4P55036 377 aaKnown RBP14.7□□□□□ -0.06
TRIM28-213ENST00000598355 ART3Q13508 389 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 GXYLT1Q4G148 440 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 OR4F3Q6IEY1 312 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 CDC73Q6P1J9 531 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 XKRXQ6PP77 449 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 C3P1Q6ZMU1 363 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 PLCZ1Q86YW0 608 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 RPRMLQ8N4K4 120 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 FADS6Q8N9I5 356 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 FAM83FQ8NEG4 500 aaPredicted RBP14.7□□□□□ -0.06
TRIM28-213ENST00000598355 ACTRT2Q8TDY3 377 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 PIK3R3Q92569 461 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 RMND5BQ96G75 393 aaPredicted RBP14.7□□□□□ -0.06
TRIM28-213ENST00000598355 TEX37Q96LM6 180 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 RTN4RQ9BZR6 473 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 LDAHQ9H6V9 325 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 MRPS18CQ9Y3D5 142 aaKnown RBP14.7□□□□□ -0.06
TRIM28-213ENST00000598355 FAM215AQ9Y5M1 114 aa14.7□□□□□ -0.06
TRIM28-213ENST00000598355 KLF2Q9Y5W3 355 aaPredicted RBP14.7□□□□□ -0.06
TRIM28-213ENST00000598355 PKDREJQ9NTG1 2253 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 IGLV3-32A0A0A0MS00 114 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 WDR1O75083 606 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 KCNK2O95069 426 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 KCNH1O95259 989 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 KITP10721 976 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 ESRRAP11474 423 aaPredicted RBP14.69□□□□□ -0.06
TRIM28-213ENST00000598355 IL12AP29459 219 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 SRD5A2P31213 254 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 CCT3P49368 545 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms