RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 WNT3P56703 355 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 HBA1P69905 142 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 HSF1Q00613 529 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 LASP1Q14847 261 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 FAM174BQ3ZCQ3 159 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 SPANXN4Q5MJ08 99 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 CDC73Q6P1J9 531 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 ANGPTL8Q6UXH0 198 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 SETXQ7Z333 2677 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 MAVSQ7Z434 540 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 FJX1Q86VR8 437 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 COX18Q8N8Q8 333 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 OR4A15Q8NGL6 344 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 FAM57AQ8TBR7 257 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 NTNG2Q96CW9 530 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 RMND5BQ96G75 393 aaPredicted RBP15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 C16orf58Q96GQ5 468 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 OR52B2Q96RD2 323 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 SPENQ96T58 3664 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 G6PC3Q9BUM1 346 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 CCDC28BQ9BUN5 200 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 PIGUQ9H490 435 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 TCF7L2Q9NQB0 619 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 DUSP22Q9NRW4 184 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 ZIM2Q9NZV7 527 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 ABCG2Q9UNQ0 655 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 C15orf41Q9Y2V0 281 aa15.81■□□□□ 0.12
SHKBP1-212ENST00000596163 DUXAA6NLW8 204 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 AQP7O14520 342 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 GNB5O14775 395 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 BCKDKO14874 412 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 SNPHO15079 494 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 TRAPPC6AO75865 159 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 IL6P05231 212 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 TPOP07202 933 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 RFPL3SP0C7P2 107 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 ACP2P11117 423 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 UQCRC2P22695 453 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 GCKP35557 465 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 RFX3P48380 749 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 AQP5P55064 265 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 STX1BP61266 288 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 IRX1P78414 480 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 POU6F2P78424 691 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 TOMM20Q15388 145 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 C3AR1Q16581 482 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 DESI1Q6ICB0 168 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 CLECL1Q8IZS7 167 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 MIER2Q8N344 545 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 TRIML2Q8N7C3 387 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 SLC16A11Q8NCK7 471 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 PIK3R3Q92569 461 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 SARAFQ96BY9 339 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 GNRHR2Q96P88 292 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 YIPF4Q9BSR8 244 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 BTBD2Q9BX70 525 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 BTNL2Q9UIR0 455 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 WIF1Q9Y5W5 379 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 POLEQ07864 2286 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 TENM4Q6N022 2769 aa15.8■□□□□ 0.12
SHKBP1-212ENST00000596163 GXYLT2A0PJZ3 443 aa15.79■□□□□ 0.12
SHKBP1-212ENST00000596163 SCN2BO60939 215 aa15.79■□□□□ 0.12
SHKBP1-212ENST00000596163 HPNP05981 417 aa15.79■□□□□ 0.12
SHKBP1-212ENST00000596163 PGRP06401 933 aa15.79■□□□□ 0.12
SHKBP1-212ENST00000596163 EVI2BP34910 448 aa15.79■□□□□ 0.12
SHKBP1-212ENST00000596163 PTGDSP41222 190 aa15.79■□□□□ 0.12
SHKBP1-212ENST00000596163 IDH3AP50213 366 aa15.79■□□□□ 0.12
SHKBP1-212ENST00000596163 DUSP5Q16690 384 aa15.79■□□□□ 0.12
SHKBP1-212ENST00000596163 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.79■□□□□ 0.12
SHKBP1-212ENST00000596163 C6orf120Q7Z4R8 191 aa15.79■□□□□ 0.12
SHKBP1-212ENST00000596163 PLCZ1Q86YW0 608 aa15.79■□□□□ 0.12
SHKBP1-212ENST00000596163 FBXO30Q8TB52 745 aa15.79■□□□□ 0.12
SHKBP1-212ENST00000596163 FAM110BQ8TC76 370 aa15.79■□□□□ 0.12
SHKBP1-212ENST00000596163 CCDC115Q96NT0 180 aa15.79■□□□□ 0.12
SHKBP1-212ENST00000596163 OR52E6Q96RD3 313 aa15.79■□□□□ 0.12
SHKBP1-212ENST00000596163 SIKE1Q9BRV8 207 aa15.79■□□□□ 0.12
SHKBP1-212ENST00000596163 TBL1XR1Q9BZK7 514 aa15.79■□□□□ 0.12
SHKBP1-212ENST00000596163 GALNT9Q9HCQ5 603 aa15.79■□□□□ 0.12
SHKBP1-212ENST00000596163 SDR39U1Q9NRG7 319 aaPredicted RBP15.79■□□□□ 0.12
SHKBP1-212ENST00000596163 SH3BGRL2Q9UJC5 107 aa15.79■□□□□ 0.12
SHKBP1-212ENST00000596163 ACAD8Q9UKU7 415 aa15.79■□□□□ 0.12
SHKBP1-212ENST00000596163 SVILO95425 2214 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 RNF103-CHMP3A0A140T963 221 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 C2orf72A6NCS6 295 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 WIPF3A6NGB9 483 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 NPIPA2E9PIF3 369 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 NPIPA3F8WFD2 350 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 FADS1O60427 444 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 KCNK2O95069 426 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 UTS2O95399 124 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 AGR2O95994 175 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 LDLRP01130 860 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 CELA3AP09093 270 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 ATP6V1C1P21283 382 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 MATN1P21941 496 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 PTPN6P29350 595 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 PHC1P78364 1004 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 EXOSC6Q5RKV6 272 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 WLSQ5T9L3 541 aa15.78■□□□□ 0.12
SHKBP1-212ENST00000596163 FNDC7Q5VTL7 733 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms