RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 PELOQ9BRX2 385 aaKnown RBP12.3□□□□□ -0.44
VRK3-205ENST00000593919 TGIF2Q9GZN2 237 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 REEP1Q9H902 201 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 AKAP7Q9P0M2 348 aaPredicted RBP12.3□□□□□ -0.44
VRK3-205ENST00000593919 KIF17Q9P2E2 1029 aa12.3□□□□□ -0.44
VRK3-205ENST00000593919 TCRBV16S1A1N1A0A5B0 115 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 DUXAA6NLW8 204 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 B4E171 279 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 MEN1O00255 615 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 CHRM4P08173 479 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 ZGLP1P0C6A0 271 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 ACP2P11117 423 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 TNFRSF1BP20333 461 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 CRHBPP24387 322 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 GALNSP34059 522 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 TSPAN7P41732 249 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 CRISP3P54108 245 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 OCA2Q04671 838 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 ZNF267Q14586 743 aaPredicted RBP12.29□□□□□ -0.44
VRK3-205ENST00000593919 TRIP6Q15654 476 aaKnown RBP12.29□□□□□ -0.44
VRK3-205ENST00000593919 NSDHLQ15738 373 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 DUSP5Q16690 384 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 ISXQ2M1V0 245 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 C6orf141Q5SZD1 244 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 ZNF691Q5VV52 312 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 BROXQ5VW32 411 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 GPR107Q5VW38 600 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 CDCP2Q5VXM1 449 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 SPPL2AQ8TCT8 520 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 CDS1Q92903 461 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 CNPPD1Q9BV87 410 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 STRADBQ9C0K7 418 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 PNO1Q9NRX1 252 aaKnown RBP12.29□□□□□ -0.44
VRK3-205ENST00000593919 SLC39A1Q9NY26 324 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 ERVK-19Q9WJR5 959 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 ZNF451Q9Y4E5 1061 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 LOXL2Q9Y4K0 774 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 PCDHGA1Q9Y5H4 931 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 CEP250Q9BV73 2442 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 C17orf105B2RV13 164 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 COQ9O75208 318 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 ONECUT2O95948 504 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 ITGAMP11215 1152 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 ETV5P41161 510 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 SELENOWP63302 87 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 IL5RAQ01344 420 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 RAPSNQ13702 412 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 ELOAQ14241 798 aaKnown RBP12.29□□□□□ -0.44
VRK3-205ENST00000593919 GPAT3Q53EU6 434 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 EXOSC6Q5RKV6 272 aaKnown RBP12.29□□□□□ -0.44
VRK3-205ENST00000593919 ATAD3BQ5T9A4 648 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 LCN10Q6JVE6 187 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 DHRS13Q6UX07 377 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 C16orf62Q7Z3J2 963 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 TMEM151BQ8IW70 566 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 ALDH16A1Q8IZ83 802 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 CDRT4Q8N9R6 151 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 SMYD1Q8NB12 490 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 PIK3C3Q8NEB9 887 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 CNIH3Q8TBE1 160 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 PTPMT1Q8WUK0 201 aaPredicted RBP12.29□□□□□ -0.44
VRK3-205ENST00000593919 C12orf43Q96C57 262 aaKnown RBP12.29□□□□□ -0.44
VRK3-205ENST00000593919 C7orf34Q96L11 122 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 ZNF578Q96N58 590 aaPredicted RBP12.29□□□□□ -0.44
VRK3-205ENST00000593919 DOHHQ9BU89 302 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 ULBP3Q9BZM4 244 aa12.29□□□□□ -0.44
VRK3-205ENST00000593919 AKIRIN1Q9H9L7 192 aaPredicted RBP12.29□□□□□ -0.44
VRK3-205ENST00000593919 PTPRZ1P23471 2315 aaPredicted RBP12.28□□□□□ -0.44
VRK3-205ENST00000593919 FREM2Q5SZK8 3169 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 SDK2Q58EX2 2172 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 PMS2P1A4D2B8 440 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 A8MUA0 341 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 SLC16A6O15403 523 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 CSO75390 466 aaKnown RBP12.28□□□□□ -0.44
VRK3-205ENST00000593919 IFNA14P01570 189 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 TNNI3P19429 210 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 RRM2P31350 389 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 MAP3K8P41279 467 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 EMDP50402 254 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 PIGFQ07326 219 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 FUT7Q11130 342 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 ZNF155Q12901 538 aaPredicted RBP12.28□□□□□ -0.44
VRK3-205ENST00000593919 MLIPQ5VWP3 458 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 AP1ARQ63HQ0 302 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 KDM4DQ6B0I6 523 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 HEPHL1Q6MZM0 1159 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 ZCCHC12Q6PEW1 402 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 RAB11FIP2Q7L804 512 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 OVCH1Q7RTY7 1134 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 PIWIL3Q7Z3Z3 882 aaKnown RBP12.28□□□□□ -0.44
VRK3-205ENST00000593919 ERI1Q8IV48 349 aaKnown RBP12.28□□□□□ -0.44
VRK3-205ENST00000593919 ATG16L2Q8NAA4 619 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 PIGUQ9H490 435 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 C14orf105Q9NVL8 296 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 GIN1Q9NXP7 522 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 B3GALT1Q9Y5Z6 326 aa12.28□□□□□ -0.44
VRK3-205ENST00000593919 A8MVJ9 347 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 FOXD2O60548 495 aaPredicted RBP12.27□□□□□ -0.44
VRK3-205ENST00000593919 PRAMEF2O60811 474 aa12.27□□□□□ -0.44
VRK3-205ENST00000593919 ABCB7O75027 752 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms