RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 LIPMQ5VYY2 423 aa16.64■□□□□ 0.25
CIRBP-237ENST00000592234 CLEC6AQ6EIG7 209 aa16.64■□□□□ 0.25
CIRBP-237ENST00000592234 EMBQ6PCB8 327 aa16.64■□□□□ 0.25
CIRBP-237ENST00000592234 PLXDC2Q6UX71 529 aa16.64■□□□□ 0.25
CIRBP-237ENST00000592234 ADGRE4PQ86SQ3 457 aa16.64■□□□□ 0.25
CIRBP-237ENST00000592234 LUZP2Q86TE4 346 aa16.64■□□□□ 0.25
CIRBP-237ENST00000592234 TRABD2AQ86V40 505 aa16.64■□□□□ 0.25
CIRBP-237ENST00000592234 OR4N2Q8NGD1 307 aa16.64■□□□□ 0.25
CIRBP-237ENST00000592234 C11orf24Q96F05 449 aaPredicted RBP16.64■□□□□ 0.25
CIRBP-237ENST00000592234 FAM111AQ96PZ2 611 aa16.64■□□□□ 0.25
CIRBP-237ENST00000592234 UCN2Q96RP3 112 aa16.64■□□□□ 0.25
CIRBP-237ENST00000592234 SLC17A7Q9P2U7 560 aa16.64■□□□□ 0.25
CIRBP-237ENST00000592234 CLCF1Q9UBD9 225 aa16.64■□□□□ 0.25
CIRBP-237ENST00000592234 RPH3AQ9Y2J0 694 aaPredicted RBP16.64■□□□□ 0.25
CIRBP-237ENST00000592234 MRPS18CQ9Y3D5 142 aaKnown RBP16.64■□□□□ 0.25
CIRBP-237ENST00000592234 PLOD2O00469 737 aa16.63■□□□□ 0.25
CIRBP-237ENST00000592234 COQ9O75208 318 aa16.63■□□□□ 0.25
CIRBP-237ENST00000592234 DDCP20711 480 aa16.63■□□□□ 0.25
CIRBP-237ENST00000592234 CHMP24386 653 aa16.63■□□□□ 0.25
CIRBP-237ENST00000592234 DPP4P27487 766 aa16.63■□□□□ 0.25
CIRBP-237ENST00000592234 NCBP2P52298 156 aaKnown RBP eCLIP16.63■□□□□ 0.25
CIRBP-237ENST00000592234 SH2D4BQ5SQS7 431 aa16.63■□□□□ 0.25
CIRBP-237ENST00000592234 WDR93Q6P2C0 686 aa16.63■□□□□ 0.25
CIRBP-237ENST00000592234 PAMR1Q6UXH9 720 aa16.63■□□□□ 0.25
CIRBP-237ENST00000592234 GRAMD2AQ8IUY3 354 aa16.63■□□□□ 0.25
CIRBP-237ENST00000592234 GCNT2Q8N0V5 402 aa16.63■□□□□ 0.25
CIRBP-237ENST00000592234 RIBC1Q8N443 379 aaPredicted RBP16.63■□□□□ 0.25
CIRBP-237ENST00000592234 BANPQ8N9N5 519 aa16.63■□□□□ 0.25
CIRBP-237ENST00000592234 OR4K17Q8NGC6 315 aa16.63■□□□□ 0.25
CIRBP-237ENST00000592234 ALPK1Q96QP1 1244 aa16.63■□□□□ 0.25
CIRBP-237ENST00000592234 YIPF4Q9BSR8 244 aa16.63■□□□□ 0.25
CIRBP-237ENST00000592234 G6PC3Q9BUM1 346 aa16.63■□□□□ 0.25
CIRBP-237ENST00000592234 MECRQ9BV79 373 aa16.63■□□□□ 0.25
CIRBP-237ENST00000592234 GATA5Q9BWX5 397 aaPredicted RBP16.63■□□□□ 0.25
CIRBP-237ENST00000592234 PARD6BQ9BYG5 372 aa16.63■□□□□ 0.25
CIRBP-237ENST00000592234 MIEF1Q9NQG6 463 aa16.63■□□□□ 0.25
CIRBP-237ENST00000592234 SIRT5Q9NXA8 310 aa16.63■□□□□ 0.25
CIRBP-237ENST00000592234 PPP4R1LQ9P1A2 415 aa16.63■□□□□ 0.25
CIRBP-237ENST00000592234 MID2Q9UJV3 735 aa16.63■□□□□ 0.25
CIRBP-237ENST00000592234 POLR3HQ9Y535 204 aaPredicted RBP16.63■□□□□ 0.25
CIRBP-237ENST00000592234 PTGDR2Q9Y5Y4 395 aa16.63■□□□□ 0.25
CIRBP-237ENST00000592234 MYO1GB0I1T2 1018 aa16.62■□□□□ 0.25
CIRBP-237ENST00000592234 ESPNB1AK53 854 aa16.62■□□□□ 0.25
CIRBP-237ENST00000592234 SCO2O43819 266 aa16.62■□□□□ 0.25
CIRBP-237ENST00000592234 JUNP05412 331 aaKnown RBP16.62■□□□□ 0.25
CIRBP-237ENST00000592234 ZNF708P17019 499 aa16.62■□□□□ 0.25
CIRBP-237ENST00000592234 KLK2P20151 261 aa16.62■□□□□ 0.25
CIRBP-237ENST00000592234 GAS1P54826 345 aa16.62■□□□□ 0.25
CIRBP-237ENST00000592234 CLDN18P56856 261 aa16.62■□□□□ 0.25
CIRBP-237ENST00000592234 PSG6Q00889 435 aa16.62■□□□□ 0.25
CIRBP-237ENST00000592234 GAB1Q13480 694 aa16.62■□□□□ 0.25
CIRBP-237ENST00000592234 CAMKMTQ7Z624 323 aa16.62■□□□□ 0.25
CIRBP-237ENST00000592234 RNF138Q8WVD3 245 aa16.62■□□□□ 0.25
CIRBP-237ENST00000592234 CAVIN3Q969G5 261 aa16.62■□□□□ 0.25
CIRBP-237ENST00000592234 GALNT8Q9NY28 637 aa16.62■□□□□ 0.25
CIRBP-237ENST00000592234 LGALS13Q9UHV8 139 aa16.62■□□□□ 0.25
CIRBP-237ENST00000592234 A0A087WV62 115 aa16.61■□□□□ 0.25
CIRBP-237ENST00000592234 ZIC3O60481 467 aa16.61■□□□□ 0.25
CIRBP-237ENST00000592234 SLITRK5O94991 958 aa16.61■□□□□ 0.25
CIRBP-237ENST00000592234 GOSR1O95249 250 aa16.61■□□□□ 0.25
CIRBP-237ENST00000592234 RAF1P04049 648 aa16.61■□□□□ 0.25
CIRBP-237ENST00000592234 CREB1P16220 341 aa16.61■□□□□ 0.25
CIRBP-237ENST00000592234 ALDH3A1P30838 453 aa16.61■□□□□ 0.25
CIRBP-237ENST00000592234 NTSP30990 170 aa16.61■□□□□ 0.25
CIRBP-237ENST00000592234 EVI2BP34910 448 aa16.61■□□□□ 0.25
CIRBP-237ENST00000592234 MC3RP41968 323 aa16.61■□□□□ 0.25
CIRBP-237ENST00000592234 DIO3P55073 304 aa16.61■□□□□ 0.25
CIRBP-237ENST00000592234 DSCR4P56555 118 aaPredicted RBP16.61■□□□□ 0.25
CIRBP-237ENST00000592234 NAA20P61599 178 aa16.61■□□□□ 0.25
CIRBP-237ENST00000592234 EEF1A1P68104 462 aaKnown RBP16.61■□□□□ 0.25
CIRBP-237ENST00000592234 KEAP1Q14145 624 aa16.61■□□□□ 0.25
CIRBP-237ENST00000592234 PRSS53Q2L4Q9 553 aa16.61■□□□□ 0.25
CIRBP-237ENST00000592234 EEF1A1P5Q5VTE0 462 aa16.61■□□□□ 0.25
CIRBP-237ENST00000592234 TMEM107Q6UX40 140 aa16.61■□□□□ 0.25
CIRBP-237ENST00000592234 CHMP1BQ7LBR1 199 aa16.61■□□□□ 0.25
CIRBP-237ENST00000592234 P4HA3Q7Z4N8 544 aa16.61■□□□□ 0.25
CIRBP-237ENST00000592234 PIGMQ9H3S5 423 aa16.61■□□□□ 0.25
CIRBP-237ENST00000592234 MKS1Q9NXB0 559 aa16.61■□□□□ 0.25
CIRBP-237ENST00000592234 C17orf51A8MQB3 221 aa16.6■□□□□ 0.25
CIRBP-237ENST00000592234 B4DXG7 233 aa16.6■□□□□ 0.25
CIRBP-237ENST00000592234 HCRTR2O43614 444 aa16.6■□□□□ 0.25
CIRBP-237ENST00000592234 TRIM13O60858 407 aa16.6■□□□□ 0.25
CIRBP-237ENST00000592234 UROSP10746 265 aa16.6■□□□□ 0.25
CIRBP-237ENST00000592234 CYP27C1Q4G0S4 372 aa16.6■□□□□ 0.25
CIRBP-237ENST00000592234 FAM71E1Q6IPT2 247 aa16.6■□□□□ 0.25
CIRBP-237ENST00000592234 ZCCHC23Q6ZST2 131 aa16.6■□□□□ 0.25
CIRBP-237ENST00000592234 UBQLNLQ8IYU4 475 aa16.6■□□□□ 0.25
CIRBP-237ENST00000592234 TCP10LQ8TDR4 215 aa16.6■□□□□ 0.25
CIRBP-237ENST00000592234 MBD6Q96DN6 1003 aa16.6■□□□□ 0.25
CIRBP-237ENST00000592234 DACH2Q96NX9 599 aa16.6■□□□□ 0.25
CIRBP-237ENST00000592234 ROPN1BQ9BZX4 212 aaPredicted RBP16.6■□□□□ 0.25
CIRBP-237ENST00000592234 DSN1Q9H410 356 aa16.6■□□□□ 0.25
CIRBP-237ENST00000592234 GLIPR2Q9H4G4 154 aa16.6■□□□□ 0.25
CIRBP-237ENST00000592234 ROPN1Q9HAT0 212 aaPredicted RBP16.6■□□□□ 0.25
CIRBP-237ENST00000592234 MYNNQ9NPC7 610 aa16.6■□□□□ 0.25
CIRBP-237ENST00000592234 SDHAF3Q9NRP4 125 aa16.6■□□□□ 0.25
CIRBP-237ENST00000592234 DDX18Q9NVP1 670 aaKnown RBP16.6■□□□□ 0.25
CIRBP-237ENST00000592234 PACSIN3Q9UKS6 424 aa16.6■□□□□ 0.25
CIRBP-237ENST00000592234 C19orf53Q9UNZ5 99 aaPredicted RBP16.6■□□□□ 0.25
CIRBP-237ENST00000592234 VPS13CQ709C8 3753 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms