RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 CLCQ05315 142 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 GUSBP1Q15486 140 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 SPIN4Q56A73 249 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 FAM180BQ6P0A1 224 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 SLC44A2Q8IWA5 706 aaPredicted RBP12.61□□□□□ -0.39
VMP1-209ENST00000588915 TMEM151AQ8N4L1 468 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 OR2M3Q8NG83 312 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 PPP1R14CQ8TAE6 165 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 UHMK1Q8TAS1 419 aaKnown RBP12.61□□□□□ -0.39
VMP1-209ENST00000588915 FIG4Q92562 907 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 KAT2AQ92830 837 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 ZNF382Q96SR6 550 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 PIGQQ9BRB3 760 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 DSN1Q9H410 356 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 HHATLQ9HCP6 504 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 STOML1Q9UBI4 398 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 MRTO4Q9UKD2 239 aaKnown RBP12.61□□□□□ -0.39
VMP1-209ENST00000588915 GRID1Q9ULK0 1009 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 ZNF337Q9Y3M9 751 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 OR10H1Q9Y4A9 318 aa12.61□□□□□ -0.39
VMP1-209ENST00000588915 GNG14A0A1W2PPG7 69 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 SERTM1A2A2V5 107 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 B4DXG7 233 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 PCDH7O60245 1069 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 SBK3P0C264 359 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 FCGR2AP12318 317 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 HK1P19367 917 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 TAC1P20366 129 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 LOXP28300 417 aaPredicted RBP12.6□□□□□ -0.39
VMP1-209ENST00000588915 KCNJ5P48544 419 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 CLK3P49761 638 aaKnown RBP12.6□□□□□ -0.39
VMP1-209ENST00000588915 SUCLG1P53597 346 aaKnown RBP12.6□□□□□ -0.39
VMP1-209ENST00000588915 RAE1P78406 368 aaKnown RBP12.6□□□□□ -0.39
VMP1-209ENST00000588915 PSG6Q00889 435 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 RAET1LQ5VY80 246 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 PLEKHM3Q6ZWE6 761 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 RPS27LQ71UM5 84 aaKnown RBP12.6□□□□□ -0.39
VMP1-209ENST00000588915 UBQLNLQ8IYU4 475 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 FAM9CQ8IZT9 166 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 CIARTQ8N365 385 aaPredicted RBP12.6□□□□□ -0.39
VMP1-209ENST00000588915 METTL25Q8N6Q8 603 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 CDYL2Q8N8U2 506 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 METTL6Q8TCB7 284 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 C16orf78Q8WTQ4 265 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 GFM2Q969S9 779 aaKnown RBP12.6□□□□□ -0.39
VMP1-209ENST00000588915 EXOSC8Q96B26 276 aaKnown RBP12.6□□□□□ -0.39
VMP1-209ENST00000588915 EFHD2Q96C19 240 aaPredicted RBP12.6□□□□□ -0.39
VMP1-209ENST00000588915 C11orf24Q96F05 449 aaPredicted RBP12.6□□□□□ -0.39
VMP1-209ENST00000588915 PAFAH2Q99487 392 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 PINK1Q9BXM7 581 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 OPN3Q9H1Y3 402 aaPredicted RBP12.6□□□□□ -0.39
VMP1-209ENST00000588915 ANKRA2Q9H9E1 313 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 UBTD1Q9HAC8 227 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 FANCFQ9NPI8 374 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 FAM120CQ9NX05 1096 aaKnown RBP12.6□□□□□ -0.39
VMP1-209ENST00000588915 TAS2R7Q9NYW3 318 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 PYCARDQ9ULZ3 195 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 PROCRQ9UNN8 238 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 STK38LQ9Y2H1 464 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 WBP11Q9Y2W2 641 aaKnown RBP12.6□□□□□ -0.39
VMP1-209ENST00000588915 AP4B1Q9Y6B7 739 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 DSCAMO60469 2012 aa12.6□□□□□ -0.39
VMP1-209ENST00000588915 OR2M5A3KFT3 312 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 CCDC151A5D8V7 595 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 TTC36A6NLP5 189 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 MYO1GB0I1T2 1018 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 CTAGE8P0CG41 777 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 TSPAN8P19075 237 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 IL11P20809 199 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 CCKARP32238 428 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 PSMD4P55036 377 aaKnown RBP12.59□□□□□ -0.39
VMP1-209ENST00000588915 ACSM2AQ08AH3 577 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 DECR1Q16698 335 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 BEX5Q5H9J7 111 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 ACSM2BQ68CK6 577 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 SH2D5Q6ZV89 423 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 FAM214BQ7L5A3 538 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 LCA5Q86VQ0 697 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 PRIMA1Q86XR5 153 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 CTAGE4Q8IX94 777 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 ZNF610Q8N9Z0 462 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 OR7G2Q8NG99 324 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 OR4N2Q8NGD1 307 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 IGFBPL1Q8WX77 278 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 BBS4Q96RK4 519 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 HBEGFQ99075 208 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 PLSCR4Q9NRQ2 329 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 SENP1Q9P0U3 644 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 C19orf53Q9UNZ5 99 aaPredicted RBP12.59□□□□□ -0.39
VMP1-209ENST00000588915 CSPG4Q6UVK1 2322 aa12.59□□□□□ -0.39
VMP1-209ENST00000588915 TLN2Q9Y4G6 2542 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 IGLV3-32A0A0A0MS00 114 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 ESYT3A0FGR9 886 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 SCO2O43819 266 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 SUPT7LO94864 414 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 SNRPAP09012 282 aaKnown RBP12.58□□□□□ -0.4
VMP1-209ENST00000588915 IFI6P09912 130 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 DDCP20711 480 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 IMPDH1P20839 514 aa12.58□□□□□ -0.4
VMP1-209ENST00000588915 HMOX2P30519 316 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms