RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 DCST2Q5T1A1 773 aa17.43■□□□□ 0.38
CLPTM1-209ENST00000588855 DNAJB8Q8NHS0 232 aa17.43■□□□□ 0.38
CLPTM1-209ENST00000588855 FAM110BQ8TC76 370 aa17.43■□□□□ 0.38
CLPTM1-209ENST00000588855 RCN3Q96D15 328 aa17.43■□□□□ 0.38
CLPTM1-209ENST00000588855 NODALQ96S42 347 aa17.43■□□□□ 0.38
CLPTM1-209ENST00000588855 IKZF5Q9H5V7 419 aa17.43■□□□□ 0.38
CLPTM1-209ENST00000588855 FBXO34Q9NWN3 711 aa17.43■□□□□ 0.38
CLPTM1-209ENST00000588855 CNOT11Q9UKZ1 510 aaKnown RBP17.43■□□□□ 0.38
CLPTM1-209ENST00000588855 PCDHGA10Q9Y5H3 936 aa17.43■□□□□ 0.38
CLPTM1-209ENST00000588855 A0A0G2JMM0 328 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 A0A1W2PPB8 328 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 A0A1W2PRS3 328 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 DUXAA6NLW8 204 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 KIR3DP1A8MWS1 328 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 HMGN4O00479 90 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 TP53I11O14683 189 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 ASNA1O43681 348 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 PRB1P04280 392 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 CYP4B1P13584 511 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 PNLIPRP2P54317 469 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 GPR85P60893 370 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 STX5Q13190 355 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 TRMT5Q32P41 509 aaKnown RBP17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 PRAMEF20Q5VT98 475 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 SLC22A10Q63ZE4 541 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 BICRALQ6AI39 1079 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 NUP54Q7Z3B4 507 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 ZAR1Q86SH2 424 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 FBXW8Q8N3Y1 598 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 TMEM178AQ8NBL3 297 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 OR52N2Q8NGI0 321 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 SPPL2AQ8TCT8 520 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 CPPED1Q9BRF8 314 aaPredicted RBP17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 TRIM8Q9BZR9 551 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 SACM1LQ9NTJ5 587 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 DEPPQ9NTK1 212 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 FLRT3Q9NZU0 649 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 MRTO4Q9UKD2 239 aaKnown RBP17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 KLF13Q9Y2Y9 288 aaPredicted RBP17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 PCDHGB6Q9Y5F9 930 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 PCDHGB3Q9Y5G1 929 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 NINQ8N4C6 2090 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 FXYD1O00168 92 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 ABCB7O75027 752 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 SORBS2O94875 1100 aaKnown RBP17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 P04436 131 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 ETFAP13804 333 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 CRATP43155 626 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 PSMD4P55036 377 aaKnown RBP17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 FUT5Q11128 374 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 EFR3AQ14156 821 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 CAPRIN1Q14444 709 aaKnown RBP17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 RUNDC3AQ59EK9 446 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 MTERF4Q7Z6M4 381 aaKnown RBP17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 XAGE5Q8WWM1 108 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 CGREF1Q99674 301 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 SLC39A3Q9BRY0 314 aa17.42■□□□□ 0.38
CLPTM1-209ENST00000588855 PRAMEF27A3QJZ7 478 aa17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 ICOSLGO75144 302 aa17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 SOX30O94993 753 aa17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 AGR2O95994 175 aa17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 PRDX6P30041 224 aa17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 ANXA11P50995 505 aaKnown RBP17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 PMP22Q01453 160 aa17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 RGNQ15493 299 aa17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 FAM91A1Q658Y4 838 aa17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 HEPHL1Q6MZM0 1159 aa17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 OLIG3Q7RTU3 272 aa17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 C16orf62Q7Z3J2 963 aa17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 SULF2Q8IWU5 870 aa17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 C10orf111Q8N326 155 aa17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 FITM2Q8N6M3 262 aa17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 PCYOX1LQ8NBM8 494 aa17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 CMTM5Q96DZ9 223 aa17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 ANKRD27Q96NW4 1050 aa17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 SECISBP2Q96T21 854 aaKnown RBP17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 PROK2Q9HC23 129 aa17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 EXD2Q9NVH0 621 aa17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 CNIH4Q9P003 139 aa17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 GMEB1Q9Y692 573 aa17.41■□□□□ 0.38
CLPTM1-209ENST00000588855 PINLYPA6NC86 204 aa17.4■□□□□ 0.38
CLPTM1-209ENST00000588855 PEX1O43933 1283 aa17.4■□□□□ 0.38
CLPTM1-209ENST00000588855 PPIBP23284 216 aaKnown RBP17.4■□□□□ 0.38
CLPTM1-209ENST00000588855 CASP3P42574 277 aa17.4■□□□□ 0.38
CLPTM1-209ENST00000588855 DNASE1L1P49184 302 aa17.4■□□□□ 0.38
CLPTM1-209ENST00000588855 MTPNP58546 118 aa17.4■□□□□ 0.38
CLPTM1-209ENST00000588855 DSTNP60981 165 aa17.4■□□□□ 0.38
CLPTM1-209ENST00000588855 RPP38P78345 283 aaKnown RBP17.4■□□□□ 0.38
CLPTM1-209ENST00000588855 TXNL4AP83876 142 aaKnown RBP17.4■□□□□ 0.38
CLPTM1-209ENST00000588855 SELPLGQ14242 412 aa17.4■□□□□ 0.38
CLPTM1-209ENST00000588855 ATAD3BQ5T9A4 648 aa17.4■□□□□ 0.38
CLPTM1-209ENST00000588855 RPUSD3Q6P087 351 aaKnown RBP17.4■□□□□ 0.38
CLPTM1-209ENST00000588855 CHDHQ8NE62 594 aaPredicted RBP17.4■□□□□ 0.38
CLPTM1-209ENST00000588855 GRHL3Q8TE85 626 aa17.4■□□□□ 0.38
CLPTM1-209ENST00000588855 LRRC58Q96CX6 371 aa17.4■□□□□ 0.38
CLPTM1-209ENST00000588855 TMCO6Q96DC7 493 aa17.4■□□□□ 0.38
CLPTM1-209ENST00000588855 SDF2Q99470 211 aa17.4■□□□□ 0.38
CLPTM1-209ENST00000588855 G6PC3Q9BUM1 346 aa17.4■□□□□ 0.38
CLPTM1-209ENST00000588855 RAD21L1Q9H4I0 556 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms