RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 KCNA7Q96RP8 456 aa12.75□□□□□ -0.37
HDAC5-203ENST00000586339 LIME1Q9H400 295 aa12.75□□□□□ -0.37
HDAC5-203ENST00000586339 MIEF1Q9NQG6 463 aa12.75□□□□□ -0.37
HDAC5-203ENST00000586339 C19orf53Q9UNZ5 99 aaPredicted RBP12.75□□□□□ -0.37
HDAC5-203ENST00000586339 PLEKHA6Q9Y2H5 1048 aa12.75□□□□□ -0.37
HDAC5-203ENST00000586339 ROS1P08922 2347 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 G3V2L1 256 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 ZIC3O60481 467 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 RSL1D1O76021 490 aaKnown RBP12.74□□□□□ -0.37
HDAC5-203ENST00000586339 PSMG1O95456 288 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 RAF1P04049 648 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 CPA2P48052 419 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 NCBP2P52298 156 aaKnown RBP eCLIP12.74□□□□□ -0.37
HDAC5-203ENST00000586339 FOXA1P55317 472 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 DNAJB13P59910 316 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 PPP2R2AP63151 447 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 BTKQ06187 659 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 C2orf80Q0P641 193 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 FOXF2Q12947 444 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 KRTAP21-3Q3LHN1 58 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 CCDC153Q494R4 210 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 SPDYAQ5MJ70 313 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 OR2A2Q6IF42 318 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 FAM71E1Q6IPT2 247 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 SH2D5Q6ZV89 423 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 OR2L13Q8N349 312 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 CCNYL1Q8N7R7 359 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 FADS6Q8N9I5 356 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 EFHD2Q96C19 240 aaPredicted RBP12.74□□□□□ -0.37
HDAC5-203ENST00000586339 INTS12Q96CB8 462 aaKnown RBP12.74□□□□□ -0.37
HDAC5-203ENST00000586339 PPCSQ9HAB8 311 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 Q9N2J8 555 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 SDHAF3Q9NRP4 125 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 DDX18Q9NVP1 670 aaKnown RBP12.74□□□□□ -0.37
HDAC5-203ENST00000586339 GALNT8Q9NY28 637 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 PPP4R1LQ9P1A2 415 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 MRTO4Q9UKD2 239 aaKnown RBP12.74□□□□□ -0.37
HDAC5-203ENST00000586339 PACSIN3Q9UKS6 424 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 EMCNQ9ULC0 261 aa12.74□□□□□ -0.37
HDAC5-203ENST00000586339 NSD1Q96L73 2696 aaPredicted RBP12.73□□□□□ -0.37
HDAC5-203ENST00000586339 SMIM23A6NLE4 172 aa12.73□□□□□ -0.37
HDAC5-203ENST00000586339 TTC36A6NLP5 189 aa12.73□□□□□ -0.37
HDAC5-203ENST00000586339 NPIPB8E9PQR5 432 aa12.73□□□□□ -0.37
HDAC5-203ENST00000586339 LINC01387J3KSC0 135 aa12.73□□□□□ -0.37
HDAC5-203ENST00000586339 UBFD1O14562 309 aaKnown RBP12.73□□□□□ -0.37
HDAC5-203ENST00000586339 JUNP05412 331 aaKnown RBP12.73□□□□□ -0.37
HDAC5-203ENST00000586339 PEPDP12955 493 aa12.73□□□□□ -0.37
HDAC5-203ENST00000586339 MC3RP41968 323 aa12.73□□□□□ -0.37
HDAC5-203ENST00000586339 STARP49675 285 aa12.73□□□□□ -0.37
HDAC5-203ENST00000586339 PSMD4P55036 377 aaKnown RBP12.73□□□□□ -0.37
HDAC5-203ENST00000586339 B3GALT5-AS1P59052 145 aa12.73□□□□□ -0.37
HDAC5-203ENST00000586339 ZNHIT3Q15649 155 aaPredicted RBP12.73□□□□□ -0.37
HDAC5-203ENST00000586339 DECR1Q16698 335 aa12.73□□□□□ -0.37
HDAC5-203ENST00000586339 CHMP1BQ7LBR1 199 aa12.73□□□□□ -0.37
HDAC5-203ENST00000586339 HOMEZQ8IX15 550 aa12.73□□□□□ -0.37
HDAC5-203ENST00000586339 GCNT2Q8N0V5 402 aa12.73□□□□□ -0.37
HDAC5-203ENST00000586339 OR4N2Q8NGD1 307 aa12.73□□□□□ -0.37
HDAC5-203ENST00000586339 CDC26Q8NHZ8 85 aa12.73□□□□□ -0.37
HDAC5-203ENST00000586339 LINC01560Q8TB33 94 aa12.73□□□□□ -0.37
HDAC5-203ENST00000586339 EPS8L3Q8TE67 593 aaKnown RBP12.73□□□□□ -0.37
HDAC5-203ENST00000586339 SMPDL3BQ92485 455 aa12.73□□□□□ -0.37
HDAC5-203ENST00000586339 ZNF764Q96H86 408 aaPredicted RBP12.73□□□□□ -0.37
HDAC5-203ENST00000586339 YIPF4Q9BSR8 244 aa12.73□□□□□ -0.37
HDAC5-203ENST00000586339 GLIPR2Q9H4G4 154 aa12.73□□□□□ -0.37
HDAC5-203ENST00000586339 RRAGDQ9NQL2 400 aaPredicted RBP12.73□□□□□ -0.37
HDAC5-203ENST00000586339 FAM120CQ9NX05 1096 aaKnown RBP12.73□□□□□ -0.37
HDAC5-203ENST00000586339 DSCAMO60469 2012 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 HEATR5AQ86XA9 2040 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 A0A1W2PNV4 684 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 SH3D21A4FU49 640 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 A8MXE2 369 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 B4DXG7 233 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 UPK1AO00322 258 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 MSTNO14793 375 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 NME6O75414 186 aaPredicted RBP12.72□□□□□ -0.37
HDAC5-203ENST00000586339 CRCPO75575 148 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 TNFSF13O75888 250 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 PROCP04070 461 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 HRGP04196 525 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 KLK2P20151 261 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 PRPH2P23942 346 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 EEFSECP57772 596 aaKnown RBP12.72□□□□□ -0.37
HDAC5-203ENST00000586339 VSNL1P62760 191 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 OCRLQ01968 901 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 KEAP1Q14145 624 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 CFAP157Q5JU67 520 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 OR5M10Q6IEU7 315 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 NOXRED1Q6NXP6 359 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 TMEM107Q6UX40 140 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 P4HA3Q7Z4N8 544 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 LUZP2Q86TE4 346 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 MEIOBQ8N635 442 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 OR2M3Q8NG83 312 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 ELP4Q96EB1 424 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 AMDHD1Q96NU7 426 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 LMF2Q9BU23 707 aaKnown RBP12.72□□□□□ -0.37
HDAC5-203ENST00000586339 C12orf65Q9H3J6 166 aaKnown RBP12.72□□□□□ -0.37
HDAC5-203ENST00000586339 PTGES2Q9H7Z7 377 aa12.72□□□□□ -0.37
HDAC5-203ENST00000586339 PLEKHF2Q9H8W4 249 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms