RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 DBTP11182 482 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 TNFRSF1BP20333 461 aa14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 CD1CP29017 333 aa14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 CSTF2P33240 577 aaKnown RBP eCLIP14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 SOAT1P35610 550 aa14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 MANFP55145 182 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 PCBP4P57723 403 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 SNRPNP63162 240 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 GPLD1P80108 840 aa14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 TGM3Q08188 693 aa14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 PUM1Q14671 1186 aaKnown RBP eCLIP14.03□□□□□ -0.164e-7■□□□□ 11.1
CDK5RAP3-236ENST00000584991 OCLNQ16625 522 aa14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 DUSP7Q16829 419 aa14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 DCST1Q5T197 706 aa14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 CD300LDQ6UXZ3 194 aa14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 ZCCHC10Q8TBK6 192 aa14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 SLC38A5Q8WUX1 472 aa14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 KLHL6Q8WZ60 621 aa14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 GAL3ST3Q96A11 431 aa14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 ZBED6CLQ96FA7 236 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 TCTN2Q96GX1 697 aa14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 ZNF354BQ96LW1 612 aa14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 CXorf36Q9H7Y0 433 aa14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 AMBNQ9NP70 447 aa14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 STARD5Q9NSY2 213 aa14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 TRAPPC4Q9Y296 219 aa14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 RPL36Q9Y3U8 105 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 GPC6Q9Y625 555 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-236ENST00000584991 ZNF318Q5VUA4 2279 aa14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 PDPK1O15530 556 aa14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 RECKO95980 971 aa14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 HIST1H1TP22492 207 aaPredicted RBP14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 ATP5A1P25705 553 aaKnown RBP14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 ARFIP1P53367 373 aa14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 BTN3A2P78410 334 aa14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 COL9A2Q14055 689 aaPredicted RBP14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 PRR23CQ6ZRP0 262 aa14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 ATCAYQ86WG3 371 aa14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 PLXDC1Q8IUK5 500 aa14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 MCATQ8IVS2 390 aaKnown RBP14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 MMP21Q8N119 569 aa14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 PARP16Q8N5Y8 322 aa14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 ACOT4Q8N9L9 421 aa14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 OR6C4Q8NGE1 309 aa14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 OR8J1Q8NGP2 316 aa14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 CD180Q99467 661 aa14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 CCDC3Q9BQI4 270 aa14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 SPATA5L1Q9BVQ7 753 aa14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 ABCB10Q9NRK6 738 aa14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 SOHLH2Q9NX45 425 aa14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 REV1Q9UBZ9 1251 aa14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 SEC14L4Q9UDX3 406 aa14.02□□□□□ -0.16
CDK5RAP3-236ENST00000584991 URADA6NGE7 173 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 J3KTA2 159 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 CTSBP07858 339 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 PNLIPP16233 465 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 CERS1P27544 350 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 CSF2RBP32927 897 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 KCNJ5P48544 419 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 ANXA11P50995 505 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 NUDT6P53370 316 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 NUBP1P53384 320 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 SLAMF1Q13291 335 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 SNAP47Q5SQN1 464 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 STEAP3Q658P3 488 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 C12orf73Q69YU5 71 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 CCDC190Q86UF4 302 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 ZNF655Q8N720 491 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 CSNK1A1LQ8N752 337 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 SCAIQ8N9R8 606 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 OR5AK3PQ8NH89 298 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 SETD6Q8TBK2 473 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 NR4A3Q92570 626 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 GTPBP3Q969Y2 492 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 TMEM80Q96HE8 168 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 OR51E2Q9H255 320 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 INIPQ9NRY2 104 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 EHD3Q9NZN3 535 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 ACSL6Q9UKU0 697 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 LOC100506127A0A0U1RQW1 187 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 FFAR1O14842 300 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 KIAA0513O60268 411 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 APOA1P02647 267 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 H1F0P07305 194 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 SMIM10L1P0DMW3 83 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 DRD2P14416 443 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 GRK5P34947 590 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 MLLT3P42568 568 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 TSFMP43897 325 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 GSSP48637 474 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 GNA13Q14344 377 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 SLC9A5Q14940 896 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 MED22Q15528 200 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 PRSS53Q2L4Q9 553 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 PLA2G2CQ5R387 149 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 CASP12Q6UXS9 341 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 C6orf120Q7Z4R8 191 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 POC5Q8NA72 575 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 PROKR2Q8NFJ6 384 aa14.01□□□□□ -0.17
CDK5RAP3-236ENST00000584991 SMIM10Q96HG1 83 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms