RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 TBCELQ5QJ74 424 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 TNFAIP8L2Q6P589 184 aaPredicted RBP12.76□□□□□ -0.37
TRAF4-215ENST00000584944 GALNTL5Q7Z4T8 443 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 DHDDSQ86SQ9 333 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 RNF130Q86XS8 419 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 BCORP1Q8N888 145 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 ZNF527Q8NB42 609 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 MDS2Q8NDY4 140 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 OR10G3Q8NGC4 313 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 GTF2H4Q92759 462 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 CDS1Q92903 461 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 DTNBP1Q96EV8 351 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 OTUB1Q96FW1 271 aaPredicted RBP12.76□□□□□ -0.37
TRAF4-215ENST00000584944 SECISBP2Q96T21 854 aaKnown RBP12.76□□□□□ -0.37
TRAF4-215ENST00000584944 FAM173AQ9BQD7 235 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 DOHHQ9BU89 302 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 THUMPD3Q9BV44 507 aaKnown RBP12.76□□□□□ -0.37
TRAF4-215ENST00000584944 TBL1XR1Q9BZK7 514 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 OR51I1Q9H343 314 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 PIGUQ9H490 435 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 ZNF385DQ9H6B1 395 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 TPT1P8Q9HAU6 139 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 GID8Q9NWU2 228 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 THUMPD1Q9NXG2 353 aaKnown RBP12.76□□□□□ -0.37
TRAF4-215ENST00000584944 B4GALT7Q9UBV7 327 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 CSAG2Q9Y5P2 127 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 SPTBN1Q01082 2364 aaKnown RBP12.76□□□□□ -0.37
TRAF4-215ENST00000584944 G3V3Y1 287 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 MRASO14807 208 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 PEX1O43933 1283 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 NEURL1O76050 574 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 NKX2-2O95096 273 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 NADKO95544 446 aaPredicted RBP12.75□□□□□ -0.37
TRAF4-215ENST00000584944 ACP2P11117 423 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 GP1BBP13224 206 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 SOX18P35713 384 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 MAGEA8P43361 318 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 MLLT10P55197 1068 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 GPR85P60893 370 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 ART3Q13508 389 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 GPAT3Q53EU6 434 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.75□□□□□ -0.371e-9■□□□□ 10.1
TRAF4-215ENST00000584944 PRAMEF20Q5VT98 475 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 SAXO2Q658L1 398 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 FIGNL1Q6PIW4 674 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 NPSR1Q6W5P4 371 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 MDGA2Q7Z553 956 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 PIGWQ7Z7B1 504 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 FBXW8Q8N3Y1 598 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 FAM26EQ8N5C1 309 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 OR4N2Q8NGD1 307 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 OR5D16Q8NGK9 328 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 RP9Q8TA86 221 aaKnown RBP12.75□□□□□ -0.37
TRAF4-215ENST00000584944 BCAS4Q8TDM0 211 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 OR7D2Q96RA2 312 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 SH3GL1Q99961 368 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 TRIM45Q9H8W5 580 aaPredicted RBP12.75□□□□□ -0.37
TRAF4-215ENST00000584944 HHATLQ9HCP6 504 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 SERHLQ9NQF3 203 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 SDHAF3Q9NRP4 125 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 GPATCH2Q9NW75 528 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 GIN1Q9NXP7 522 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 BOKQ9UMX3 212 aaPredicted RBP12.75□□□□□ -0.37
TRAF4-215ENST00000584944 PCDHB14Q9Y5E9 798 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 PCDHGB6Q9Y5F9 930 aa12.75□□□□□ -0.37
TRAF4-215ENST00000584944 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 GXYLT2A0PJZ3 443 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 PRAMEF25A6NGN4 478 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 C5orf58C9J3I9 102 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 H3BNH8 94 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 CLIC1O00299 241 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 SCDO00767 359 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 ASNA1O43681 348 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 SNX4O95219 450 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 IL33O95760 270 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 OR12D1P0DN82 309 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 NR2F1P10589 423 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 CNR1P21554 472 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 ZFP36L2P47974 494 aaKnown RBP12.74□□□□□ -0.37
TRAF4-215ENST00000584944 DCST2Q5T1A1 773 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.74□□□□□ -0.37
TRAF4-215ENST00000584944 GALNT10Q86SR1 603 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 CISD2Q8N5K1 135 aaKnown RBP12.74□□□□□ -0.37
TRAF4-215ENST00000584944 ZNF614Q8N883 585 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 POGLUT1Q8NBL1 392 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 RAB8BQ92930 207 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 GIMAP5Q96F15 307 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 PSMG3-AS1Q96PY0 264 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 HOXD1Q9GZZ0 328 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 LIPT1Q9Y234 373 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 ICE1Q9Y2F5 2266 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 DOCK10Q96BY6 2186 aa12.74□□□□□ -0.37
TRAF4-215ENST00000584944 TNRC6AQ8NDV7 1962 aaKnown RBP12.74□□□□□ -0.37
TRAF4-215ENST00000584944 TFECO14948 347 aaPredicted RBP12.73□□□□□ -0.37
TRAF4-215ENST00000584944 UGT2B11O75310 529 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 STX11O75558 287 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 KCNK2O95069 426 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 UTS2O95399 124 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 NPPAP01160 153 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 CCL3P10147 92 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms