RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 LTB4RQ15722 352 aa11.99□□□□□ -0.49
COPS3-218ENST00000584216 CT45A2Q5DJT8 189 aa11.99□□□□□ -0.49
COPS3-218ENST00000584216 PPP4R4Q6NUP7 873 aa11.99□□□□□ -0.49
COPS3-218ENST00000584216 C22orf34Q6ZV56 151 aa11.99□□□□□ -0.49
COPS3-218ENST00000584216 PPM1NQ8N819 430 aa11.99□□□□□ -0.49
COPS3-218ENST00000584216 OR2M3Q8NG83 312 aa11.99□□□□□ -0.49
COPS3-218ENST00000584216 KCTD4Q8WVF5 259 aa11.99□□□□□ -0.49
COPS3-218ENST00000584216 VSTM2LQ96N03 204 aa11.99□□□□□ -0.49
COPS3-218ENST00000584216 CDK15Q96Q40 435 aa11.99□□□□□ -0.49
COPS3-218ENST00000584216 NTMT1Q9BV86 223 aa11.99□□□□□ -0.49
COPS3-218ENST00000584216 AMBRA1Q9C0C7 1298 aa11.99□□□□□ -0.49
COPS3-218ENST00000584216 ZBTB26Q9HCK0 441 aa11.99□□□□□ -0.49
COPS3-218ENST00000584216 HHATLQ9HCP6 504 aa11.99□□□□□ -0.49
COPS3-218ENST00000584216 GIMAP4Q9NUV9 329 aa11.99□□□□□ -0.49
COPS3-218ENST00000584216 TAS2R9Q9NYW1 312 aa11.99□□□□□ -0.49
COPS3-218ENST00000584216 SENP1Q9P0U3 644 aa11.99□□□□□ -0.49
COPS3-218ENST00000584216 CPSF2Q9P2I0 782 aaKnown RBP11.99□□□□□ -0.49
COPS3-218ENST00000584216 CDC42EP3Q9UKI2 254 aa11.99□□□□□ -0.49
COPS3-218ENST00000584216 UTS2RQ9UKP6 389 aa11.99□□□□□ -0.49
COPS3-218ENST00000584216 MCTS1Q9ULC4 181 aaKnown RBP11.99□□□□□ -0.49
COPS3-218ENST00000584216 TMCO1Q9UM00 188 aa11.99□□□□□ -0.49
COPS3-218ENST00000584216 RNF115Q9Y4L5 304 aa11.99□□□□□ -0.49
COPS3-218ENST00000584216 EXPH5Q8NEV8 1989 aa11.99□□□□□ -0.49
COPS3-218ENST00000584216 DSCAMO60469 2012 aa11.99□□□□□ -0.49
COPS3-218ENST00000584216 OR2M5A3KFT3 312 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 H0YC42 278 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 PHF1O43189 567 aaPredicted RBP11.98□□□□□ -0.49
COPS3-218ENST00000584216 SCO2O43819 266 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 DLX3O60479 287 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 SS18L1O75177 396 aaPredicted RBP11.98□□□□□ -0.49
COPS3-218ENST00000584216 ESRRBO95718 433 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 PLAUP00749 431 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 FAM157CP0CG43 387 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 IL11P20809 199 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 TPD52P55327 224 aaPredicted RBP11.98□□□□□ -0.49
COPS3-218ENST00000584216 CLDN20P56880 219 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 CORO7P57737 925 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 GGTA1PQ4G0N0 100 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 ZNF628Q5EBL2 1059 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 SLC44A2Q8IWA5 706 aaPredicted RBP11.98□□□□□ -0.49
COPS3-218ENST00000584216 CENPLQ8N0S6 344 aaPredicted RBP11.98□□□□□ -0.49
COPS3-218ENST00000584216 STEAP2Q8NFT2 490 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 OR52B6Q8NGF0 335 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 EFHD2Q96C19 240 aaPredicted RBP11.98□□□□□ -0.49
COPS3-218ENST00000584216 TM4SF18Q96CE8 201 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 C1GALT1C1Q96EU7 318 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 CNRIP1Q96F85 164 aaPredicted RBP11.98□□□□□ -0.49
COPS3-218ENST00000584216 HS6ST2Q96MM7 605 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 ZNF681Q96N22 645 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 HDHD5Q9BXW7 423 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 SHCBP1LQ9BZQ2 653 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 ESRP2Q9H6T0 727 aaKnown RBP11.98□□□□□ -0.49
COPS3-218ENST00000584216 BRF2Q9HAW0 419 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 LRTM1Q9HBL6 345 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 WHRNQ9P202 907 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 MRTO4Q9UKD2 239 aaKnown RBP11.98□□□□□ -0.49
COPS3-218ENST00000584216 NFU1Q9UMS0 254 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 SNX24Q9Y343 169 aa11.98□□□□□ -0.49
COPS3-218ENST00000584216 A0A1W2PP18 115 aa11.97□□□□□ -0.49
COPS3-218ENST00000584216 OR7A17O14581 309 aa11.97□□□□□ -0.49
COPS3-218ENST00000584216 ZSCAN12O43309 604 aa11.97□□□□□ -0.49
COPS3-218ENST00000584216 COQ9O75208 318 aa11.97□□□□□ -0.49
COPS3-218ENST00000584216 AQP8O94778 261 aa11.97□□□□□ -0.49
COPS3-218ENST00000584216 KLHL2O95198 593 aa11.97□□□□□ -0.49
COPS3-218ENST00000584216 SIX3O95343 332 aaPredicted RBP11.97□□□□□ -0.49
COPS3-218ENST00000584216 PSMB1P20618 241 aaKnown RBP11.97□□□□□ -0.49
COPS3-218ENST00000584216 CYP27C1Q4G0S4 372 aa11.97□□□□□ -0.49
COPS3-218ENST00000584216 SGO1Q5FBB7 561 aa11.97□□□□□ -0.49
COPS3-218ENST00000584216 GTF2IRD2BQ6EKJ0 949 aa11.97□□□□□ -0.49
COPS3-218ENST00000584216 GTF2IRD2Q86UP8 949 aa11.97□□□□□ -0.49
COPS3-218ENST00000584216 EXOC3L1Q86VI1 746 aa11.97□□□□□ -0.49
COPS3-218ENST00000584216 MED12LQ86YW9 2145 aa11.97□□□□□ -0.49
COPS3-218ENST00000584216 CCDC116Q8IYX3 515 aa11.97□□□□□ -0.49
COPS3-218ENST00000584216 UHMK1Q8TAS1 419 aaKnown RBP11.97□□□□□ -0.49
COPS3-218ENST00000584216 SMAP2Q8WU79 429 aaPredicted RBP11.97□□□□□ -0.49
COPS3-218ENST00000584216 MTBPQ96DY7 904 aa11.97□□□□□ -0.49
COPS3-218ENST00000584216 USB1Q9BQ65 265 aaKnown RBP11.97□□□□□ -0.49
COPS3-218ENST00000584216 SLCO5A1Q9H2Y9 848 aa11.97□□□□□ -0.49
COPS3-218ENST00000584216 ALG2Q9H553 416 aa11.97□□□□□ -0.49
COPS3-218ENST00000584216 FOLH1BQ9HBA9 442 aa11.97□□□□□ -0.49
COPS3-218ENST00000584216 MED11Q9P086 117 aa11.97□□□□□ -0.49
COPS3-218ENST00000584216 SNX6Q9UNH7 406 aa11.97□□□□□ -0.49
COPS3-218ENST00000584216 CLOCKO15516 846 aa11.96□□□□□ -0.49
COPS3-218ENST00000584216 PLOD3O60568 738 aa11.96□□□□□ -0.49
COPS3-218ENST00000584216 SYNGR4O95473 234 aa11.96□□□□□ -0.49
COPS3-218ENST00000584216 C2P06681 752 aa11.96□□□□□ -0.49
COPS3-218ENST00000584216 CD3EP07766 207 aa11.96□□□□□ -0.49
COPS3-218ENST00000584216 PYGBP11216 843 aa11.96□□□□□ -0.49
COPS3-218ENST00000584216 ZNF17P17021 662 aa11.96□□□□□ -0.49
COPS3-218ENST00000584216 MPIP34949 423 aa11.96□□□□□ -0.49
COPS3-218ENST00000584216 ACVR1BP36896 505 aa11.96□□□□□ -0.49
COPS3-218ENST00000584216 PAFAH1B1P43034 410 aa11.96□□□□□ -0.49
COPS3-218ENST00000584216 EIF1AXP47813 144 aaKnown RBP11.96□□□□□ -0.49
COPS3-218ENST00000584216 PSMD4P55036 377 aaKnown RBP11.96□□□□□ -0.49
COPS3-218ENST00000584216 IRF9Q00978 393 aa11.96□□□□□ -0.49
COPS3-218ENST00000584216 DUSP2Q05923 314 aa11.96□□□□□ -0.49
COPS3-218ENST00000584216 GALNT1Q10472 559 aaPredicted RBP11.96□□□□□ -0.49
COPS3-218ENST00000584216 STX5Q13190 355 aa11.96□□□□□ -0.49
COPS3-218ENST00000584216 DECR1Q16698 335 aa11.96□□□□□ -0.49
COPS3-218ENST00000584216 NPSR1Q6W5P4 371 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms