RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	MED11	Q9P086	117 aa		13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	NIPBL	Q6KC79	2804 aa	eCLIP	13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732		H3BML4	177 aa		13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	MSTN	O14793	375 aa		13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	GMFG	O60234	142 aa		13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	COQ9	O75208	318 aa		13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	JUN	P05412	331 aa	Known RBP	13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	ANXA4	P09525	319 aa	Predicted RBP	13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	PEPD	P12955	493 aa		13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	ECHS1	P30084	290 aa		13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	CD79B	P40259	229 aa		13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	MC3R	P41968	323 aa		13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	NCBP2	P52298	156 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	EEF1A1	P68104	462 aa	Known RBP	13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	MRPS22	P82650	360 aa	Known RBP	13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	C2orf80	Q0P641	193 aa		13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	PRSS53	Q2L4Q9	553 aa		13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	EEF1A1P5	Q5VTE0	462 aa		13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	OR2A2	Q6IF42	318 aa		13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	PPP4R4	Q6NUP7	873 aa		13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	TMEM107	Q6UX40	140 aa		13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	BTLA	Q7Z6A9	289 aa		13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	SAMD14	Q8IZD0	417 aa	Predicted RBP	13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	OR2M3	Q8NG83	312 aa		13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	RNF138	Q8WVD3	245 aa		13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	ZNF592	Q92610	1267 aa		13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	ZC3HAV1L	Q96H79	300 aa	Known RBP	13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	MED18	Q9BUE0	208 aa		13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	PINK1	Q9BXM7	581 aa		13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	TAS2R9	Q9NYW1	312 aa		13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	MRPS18C	Q9Y3D5	142 aa	Known RBP	13.67	□□□□□ -0.22
SREBF1-222	ENST00000583732	PCNX3	Q9H6A9	2034 aa		13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	DEFB108A	A8MXU0	73 aa		13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	GOLGA8R	I6L899	631 aa		13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	CTIF	O43310	598 aa	Known RBP	13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	PLOD3	O60568	738 aa		13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	SMPD2	O60906	423 aa		13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	POU2F1	P14859	743 aa		13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	ATP5F1	P24539	256 aa	Predicted RBP	13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	CCKAR	P32238	428 aa		13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	MPI	P34949	423 aa		13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	KCNJ5	P48544	419 aa		13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	SUCLG1	P53597	346 aa	Known RBP	13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	CLDN15	P56746	228 aa		13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	PSG6	Q00889	435 aa		13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	SPDYA	Q5MJ70	313 aa		13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	SHE	Q5VZ18	495 aa		13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	ZNF474	Q6S9Z5	364 aa	Predicted RBP	13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	FADS6	Q8N9I5	356 aa		13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	ZNF845	Q96IR2	970 aa	Predicted RBP	13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	C16orf45	Q96MC5	204 aa	Predicted RBP	13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	RTN4R	Q9BZR6	473 aa		13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	TSPYL1	Q9H0U9	437 aa		13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	STMN4	Q9H169	189 aa	Predicted RBP	13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	NFU1	Q9UMS0	254 aa		13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	ZNF337	Q9Y3M9	751 aa		13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	POLR3H	Q9Y535	204 aa	Predicted RBP	13.66	□□□□□ -0.22
SREBF1-222	ENST00000583732	NAV3	Q8IVL0	2385 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	SHISA8	B8ZZ34	492 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	SMAD7	O15105	426 aa	Known RBP	13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	ARHGEF9	O43307	516 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	CRH	P06850	196 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	DDC	P20711	480 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	IMPDH1	P20839	514 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	GCA	P28676	217 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	KIR2DL2	P43627	348 aa	Predicted RBP	13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	FOXA1	P55317	472 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	PSPH	P78330	225 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	ZNF763	Q0D2J5	394 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	LCP2	Q13094	533 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	BCL2A1	Q16548	175 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	IMPG1	Q17R60	797 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	WHAMMP3	Q1A5X7	153 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	LGSN	Q5TDP6	509 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	ANKRD34A	Q69YU3	496 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	MMGT1	Q8N4V1	131 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	FNDC9	Q8TBE3	224 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732		Q96MF0	132 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	CCL19	Q99731	98 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	PIGQ	Q9BRB3	760 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	MID1IP1	Q9NPA3	183 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	MIEF1	Q9NQG6	463 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	DDX18	Q9NVP1	670 aa	Known RBP	13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	ZNF226	Q9NYT6	803 aa		13.65	□□□□□ -0.22
SREBF1-222	ENST00000583732	UQCRHL	A0A096LP55	91 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	OR2M5	A3KFT3	312 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	MYO1G	B0I1T2	1018 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732		H7C1Q1	480 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	FADS1	O60427	444 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	ENO1	P06733	434 aa	Known RBP	13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	HEXA	P06865	529 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	CRYGS	P22914	178 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	NTS	P30990	170 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	UGT2B10	P36537	528 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	PKNOX1	P55347	436 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	CLDN20	P56880	219 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	EEFSEC	P57772	596 aa	Known RBP	13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	PON3	Q15166	354 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	DECR1	Q16698	335 aa		13.64	□□□□□ -0.23
SREBF1-222	ENST00000583732	EXOC3L2	Q2M3D2	409 aa		13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms