RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 ABHD17CQ6PCB6 329 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 ANGPTL8Q6UXH0 198 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 TTLL10Q6ZVT0 673 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 SERPINA11Q86U17 422 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 KMT5CQ86Y97 462 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 MICU2Q8IYU8 434 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 PQLC1Q8N2U9 271 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 CELF2-AS1Q8N7Q2 184 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 ACOT4Q8N9L9 421 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 OR5P2Q8WZ92 322 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 FIG4Q92562 907 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 TM4SF18Q96CE8 201 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 ZBED6CLQ96FA7 236 aaPredicted RBP9.54□□□□□ -0.88
SS18-221ENST00000582448 DUS3LQ96G46 650 aaKnown RBP9.54□□□□□ -0.88
SS18-221ENST00000582448 REXO5Q96IC2 774 aaKnown RBP9.54□□□□□ -0.88
SS18-221ENST00000582448 CPPED1Q9BRF8 314 aaPredicted RBP9.54□□□□□ -0.88
SS18-221ENST00000582448 SORBS1Q9BX66 1292 aaKnown RBP9.54□□□□□ -0.88
SS18-221ENST00000582448 UGT2B28Q9BY64 529 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 TRIM8Q9BZR9 551 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 KLHL4Q9C0H6 718 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 KAT8Q9H7Z6 458 aaKnown RBP9.54□□□□□ -0.88
SS18-221ENST00000582448 FANCEQ9HB96 536 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 MS4A12Q9NXJ0 267 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 TAS2R9Q9NYW1 312 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 SLC25A37Q9NYZ2 338 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 EHD3Q9NZN3 535 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 SEMA5BQ9P283 1151 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 TMEFF2Q9UIK5 374 aaPredicted RBP9.54□□□□□ -0.88
SS18-221ENST00000582448 PHF11Q9UIL8 331 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 POMT2Q9UKY4 750 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 B3GNT3Q9Y2A9 372 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 A0A0A6YYD5 115 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 C1orf226A1L170 272 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 SLC9B1P1A6NJY1 282 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 TMEM150CB9EJG8 249 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 MASP2O00187 686 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 CXCR6O00574 342 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 B3GALT2O43825 422 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 EIF2S1P05198 315 aaKnown RBP9.53□□□□□ -0.88
SS18-221ENST00000582448 INHBBP09529 407 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 PRF1P14222 555 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 GGT1P19440 569 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 ATP6V1B2P21281 511 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 ATP5A1P25705 553 aaKnown RBP9.53□□□□□ -0.88
SS18-221ENST00000582448 BUD31P41223 144 aaPredicted RBP9.53□□□□□ -0.88
SS18-221ENST00000582448 CDKN2CP42773 168 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 PRIM2P49643 509 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 ANXA11P50995 505 aaKnown RBP9.53□□□□□ -0.88
SS18-221ENST00000582448 MANFP55145 182 aaKnown RBP9.53□□□□□ -0.88
SS18-221ENST00000582448 WNT3P56703 355 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 RAB8AP61006 207 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 BTN3A2P78410 334 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 SELPLGQ14242 412 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 FAM98BQ52LJ0 330 aaKnown RBP9.53□□□□□ -0.88
SS18-221ENST00000582448 NDUFAF5Q5TEU4 345 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 BHLHB9Q6PI77 547 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 RAB43Q86YS6 212 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 SAMD14Q8IZD0 417 aaPredicted RBP9.53□□□□□ -0.88
SS18-221ENST00000582448 CLECL1Q8IZS7 167 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 FAM47BQ8NA70 645 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 OR8K5Q8NH50 307 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 GOT1L1Q8NHS2 421 aaPredicted RBP9.53□□□□□ -0.88
SS18-221ENST00000582448 FLVCR1-AS1Q8TAF5 88 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 DNAJC9Q8WXX5 260 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 N4BP2L2Q92802 583 aaPredicted RBP9.53□□□□□ -0.88
SS18-221ENST00000582448 MIEF2Q96C03 454 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 AURKBQ96GD4 344 aaPredicted RBP9.53□□□□□ -0.88
SS18-221ENST00000582448 ZNF583Q96ND8 569 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 OR2A5Q96R48 311 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 BBS4Q96RK4 519 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 SERINC2Q96SA4 455 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 CD180Q99467 661 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 GORASP2Q9H8Y8 452 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 TPT1P8Q9HAU6 139 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 ARMC1Q9NVT9 282 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 C5AR2Q9P296 337 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 ENTPD4Q9Y227 616 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 OSGIN2Q9Y236 505 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 ZNF780BQ9Y6R6 833 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 UNC79Q9P2D8 2635 aa9.53□□□□□ -0.88
SS18-221ENST00000582448 A0A0G2JN53 185 aa9.52□□□□□ -0.89
SS18-221ENST00000582448 TMEM247A6NEH6 219 aa9.52□□□□□ -0.89
SS18-221ENST00000582448 KRTAP9-7A8MTY7 169 aa9.52□□□□□ -0.89
SS18-221ENST00000582448 C9J4A7 227 aa9.52□□□□□ -0.89
SS18-221ENST00000582448 H3BNX3 289 aa9.52□□□□□ -0.89
SS18-221ENST00000582448 PEX12O00623 359 aa9.52□□□□□ -0.89
SS18-221ENST00000582448 LRRTM2O43300 516 aa9.52□□□□□ -0.89
SS18-221ENST00000582448 PEX1O43933 1283 aa9.52□□□□□ -0.89
SS18-221ENST00000582448 SCN2BO60939 215 aa9.52□□□□□ -0.89
SS18-221ENST00000582448 C6orf47O95873 294 aa9.52□□□□□ -0.89
SS18-221ENST00000582448 TBX6O95947 436 aaPredicted RBP9.52□□□□□ -0.89
SS18-221ENST00000582448 STATHP02808 62 aa9.52□□□□□ -0.89
SS18-221ENST00000582448 ZNF888P0CJ79 500 aaPredicted RBP9.52□□□□□ -0.89
SS18-221ENST00000582448 NCK1P16333 377 aa9.52□□□□□ -0.89
SS18-221ENST00000582448 BMP7P18075 431 aa9.52□□□□□ -0.89
SS18-221ENST00000582448 AGXTP21549 392 aa9.52□□□□□ -0.89
SS18-221ENST00000582448 UQCRC2P22695 453 aa9.52□□□□□ -0.89
SS18-221ENST00000582448 FASP25445 335 aa9.52□□□□□ -0.89
SS18-221ENST00000582448 CRATP43155 626 aa9.52□□□□□ -0.89
SS18-221ENST00000582448 OR4D2P58180 307 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms