RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 PDLIM5Q96HC4 596 aaKnown RBP6.78□□□□□ -1.32
SMARCE1-217ENST00000580654 ADGRG7Q96K78 797 aa6.78□□□□□ -1.32
SMARCE1-217ENST00000580654 EGFL8Q99944 293 aa6.78□□□□□ -1.32
SMARCE1-217ENST00000580654 PIMREGQ9BSJ6 248 aa6.78□□□□□ -1.32
SMARCE1-217ENST00000580654 POTEKPQ9BYX7 375 aa6.78□□□□□ -1.32
SMARCE1-217ENST00000580654 FRMD8P1Q9BZ68 369 aaPredicted RBP6.78□□□□□ -1.32
SMARCE1-217ENST00000580654 STMN4Q9H169 189 aaPredicted RBP6.78□□□□□ -1.32
SMARCE1-217ENST00000580654 OR51B5Q9H339 312 aa6.78□□□□□ -1.32
SMARCE1-217ENST00000580654 DSN1Q9H410 356 aa6.78□□□□□ -1.32
SMARCE1-217ENST00000580654 ZBTB26Q9HCK0 441 aa6.78□□□□□ -1.32
SMARCE1-217ENST00000580654 FANCFQ9NPI8 374 aa6.78□□□□□ -1.32
SMARCE1-217ENST00000580654 GPRC5BQ9NZH0 403 aa6.78□□□□□ -1.32
SMARCE1-217ENST00000580654 PHF11Q9UIL8 331 aa6.78□□□□□ -1.32
SMARCE1-217ENST00000580654 SNX8Q9Y5X2 465 aa6.78□□□□□ -1.32
SMARCE1-217ENST00000580654 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.78□□□□□ -1.32
SMARCE1-217ENST00000580654 UQCRHLA0A096LP55 91 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 A0A0A6YYD5 115 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 OR6C70A6NIJ9 312 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 ESPNB1AK53 854 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 NDUFS8O00217 210 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 TO15178 435 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 ACOX3O15254 700 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 TSPAN2O60636 221 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 PLGP00747 810 aaPredicted RBP6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 ADAP00813 363 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 CCDC175P0C221 793 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 NR2F6P10588 404 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 IL32P24001 234 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 HSD3B2P26439 372 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 TLX1P31314 330 aaPredicted RBP6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 EIF1AXP47813 144 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 HNMTP50135 292 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 RPS3AP61247 264 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 CDK16Q00536 496 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 E2F2Q14209 437 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 EXOSC7Q15024 291 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 SGCBQ16585 318 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 ZSWIM7Q19AV6 140 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 TMEM44Q2T9K0 475 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 KHDRBS2Q5VWX1 349 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 PPP4R4Q6NUP7 873 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 FAM111BQ6SJ93 734 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 Q6ZSR9 355 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 NUFIP2Q7Z417 695 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 GALNT10Q86SR1 603 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 STK32CQ86UX6 486 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 CCDC25Q86WR0 208 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 FBXL14Q8N1E6 418 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 UBL4BQ8N7F7 174 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 GBP7Q8N8V2 638 aaPredicted RBP6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 OR4K17Q8NGC6 315 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 CALML6Q8TD86 181 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 GFM2Q969S9 779 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 TMBIM1Q969X1 311 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 TMCO6Q96DC7 493 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 COL21A1Q96P44 957 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 SORCS2Q96PQ0 1159 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 BTBD9Q96Q07 612 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 FAM167BQ9BTA0 163 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 RBM4Q9BWF3 364 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 PRRG4Q9BZD6 226 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 RTN4RQ9BZR6 473 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 BPESC1Q9GZL8 116 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 LACRTQ9GZZ8 138 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 MED11Q9P086 117 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 SLC17A6Q9P2U8 582 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 ZNF639Q9UID6 485 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 REXO2Q9Y3B8 237 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 OARD1Q9Y530 152 aa6.77□□□□□ -1.33
SMARCE1-217ENST00000580654 MAGEB16A2A368 324 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 ZNF814B7Z6K7 855 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 TRIM77I1YAP6 450 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 LINC01387J3KSC0 135 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 EIF1AYO14602 144 aaKnown RBP6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 CLGNO14967 610 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 NME6O75414 186 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 CBX7O95931 251 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 TUBBP07437 444 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 ARAFP10398 606 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 EPB42P16452 691 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 NT5EP21589 574 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 DRD5P21918 477 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 BSGP35613 385 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 GGT5P36269 586 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 MAGEA6P43360 314 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 EMDP50402 254 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 FABP6P51161 128 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 NAP1L1P55209 391 aaKnown RBP6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 MAP4K2Q12851 820 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 CHIT1Q13231 466 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 PPA1Q15181 289 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 TSNQ15631 228 aaKnown RBP6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 PRICKLE4Q2TBC4 344 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 IQCCQ4KMZ1 466 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 C4orf46Q504U0 113 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 C4orf22Q6V702 233 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 BHLHA15Q7RTS1 189 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 PEX26Q7Z412 305 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 VSTM4Q8IW00 320 aa6.76□□□□□ -1.33
SMARCE1-217ENST00000580654 LAS2Q8IYD9 372 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms