RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 C19orf84I3L1E1 186 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 HDAC3O15379 428 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 CDC40O60508 579 aaKnown RBP eCLIP7.9□□□□□ -1.14
SMG6-216ENST00000575176 HCN1O60741 890 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 PDE9AO76083 593 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 TOXO94900 526 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 C6orf47O95873 294 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 HMGN2P05204 90 aaKnown RBP7.9□□□□□ -1.14
SMG6-216ENST00000575176 IGFBP2P18065 325 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 PRPS1L1P21108 318 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 MAPK1P28482 360 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 EPHA3P29320 983 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 EVI2BP34910 448 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 PTGS2P35354 604 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 HPCAL1P37235 193 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 ADH7P40394 386 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 NRG3P56975 720 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 KCNJ2P63252 427 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 PSPHP78330 225 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 MRPS22P82650 360 aaKnown RBP7.9□□□□□ -1.14
SMG6-216ENST00000575176 ELOAQ14241 798 aaKnown RBP7.9□□□□□ -1.14
SMG6-216ENST00000575176 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.9□□□□□ -1.14
SMG6-216ENST00000575176 TMEM44Q2T9K0 475 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 CYP27C1Q4G0S4 372 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 EIPR1Q53HC9 387 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 SPANXN4Q5MJ08 99 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.9□□□□□ -1.14
SMG6-216ENST00000575176 C6orf163Q5TEZ5 329 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 HLA-DQA1Q5Y7H0 255 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 TMEM198Q66K66 360 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 OR4F3Q6IEY1 312 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 ANGPTL8Q6UXH0 198 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 MAMDC2Q7Z304 686 aaPredicted RBP7.9□□□□□ -1.14
SMG6-216ENST00000575176 ADGRE4PQ86SQ3 457 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 LSRQ86X29 649 aaPredicted RBP7.9□□□□□ -1.14
SMG6-216ENST00000575176 SLC44A2Q8IWA5 706 aaPredicted RBP7.9□□□□□ -1.14
SMG6-216ENST00000575176 HOMEZQ8IX15 550 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 NAXEQ8NCW5 288 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 NEIL3Q8TAT5 605 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 SFXN5Q8TD22 340 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 ZNF75CPQ92670 426 aaPredicted RBP7.9□□□□□ -1.14
SMG6-216ENST00000575176 C7orf26Q96N11 449 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 NPAS1Q99742 590 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 VKORC1Q9BQB6 163 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 BHLHE41Q9C0J9 482 aaPredicted RBP7.9□□□□□ -1.14
SMG6-216ENST00000575176 PRDM14Q9GZV8 571 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 SLC52A3Q9NQ40 469 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 EQTNQ9NQ60 294 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 SERHLQ9NQF3 203 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 PFDN4Q9NQP4 134 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 SLC6A13Q9NSD5 602 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 THAP1Q9NVV9 213 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 TAS2R9Q9NYW1 312 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 CBLCQ9ULV8 474 aa7.9□□□□□ -1.14
SMG6-216ENST00000575176 BOKQ9UMX3 212 aaPredicted RBP7.9□□□□□ -1.14
SMG6-216ENST00000575176 ACOT7O00154 380 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 CCL21O00585 134 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 TP53I11O14683 189 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 GNB5O14775 395 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 OIP5O43482 229 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 ABCB7O75027 752 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 KCNK2O95069 426 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 SNX4O95219 450 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 NGFRP08138 427 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 NID1P14543 1247 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 DCTP40126 519 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 CDKN2CP42773 168 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 MRPL19P49406 292 aaKnown RBP7.89□□□□□ -1.15
SMG6-216ENST00000575176 MVDP53602 400 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 CLDN15P56746 228 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 UFM1P61960 85 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 PLGLB1Q02325 96 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 MAPK11Q15759 364 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 CD226Q15762 336 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 GRAMD1BQ3KR37 738 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 HHATQ5VTY9 493 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 AP1ARQ63HQ0 302 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 VASNQ6EMK4 673 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 SLC30A6Q6NXT4 461 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 R3HCC1LQ7Z5L2 792 aaKnown RBP7.89□□□□□ -1.15
SMG6-216ENST00000575176 GALNT10Q86SR1 603 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 CLEC4FQ8N1N0 589 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 ZNF808Q8N4W9 903 aaPredicted RBP7.89□□□□□ -1.15
SMG6-216ENST00000575176 CDRT4Q8N9R6 151 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 FAM83FQ8NEG4 500 aaPredicted RBP7.89□□□□□ -1.15
SMG6-216ENST00000575176 NUP43Q8NFH3 380 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 OR2M3Q8NG83 312 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 GOT1L1Q8NHS2 421 aaPredicted RBP7.89□□□□□ -1.15
SMG6-216ENST00000575176 ZFP28Q8NHY6 868 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 OR5P2Q8WZ92 322 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 DUSP26Q9BV47 211 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 UGT2B28Q9BY64 529 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 ZNF385DQ9H6B1 395 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 MANSC1Q9H8J5 431 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 NEUROD4Q9HD90 331 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 NPDC1Q9NQX5 325 aaPredicted RBP7.89□□□□□ -1.15
SMG6-216ENST00000575176 FAM120CQ9NX05 1096 aaKnown RBP7.89□□□□□ -1.15
SMG6-216ENST00000575176 GIN1Q9NXP7 522 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 SH3BP4Q9P0V3 963 aa7.89□□□□□ -1.15
SMG6-216ENST00000575176 KCNE5Q9UJ90 142 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms