RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 CDCA4Q9BXL8 241 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 PRO3102Q9H379 93 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 ANKRD19PQ9H560 264 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 EGLN3Q9H6Z9 239 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 CNIH4Q9P003 139 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 SATB2Q9UPW6 733 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 THADAQ6YHU6 1953 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 TLX2O43763 284 aaPredicted RBP13.09□□□□□ -0.31
VPS33B-208ENST00000574755 AIREO43918 545 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 NTN1O95631 604 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 PROS1P07225 676 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 THBS1P07996 1170 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 PIPP12273 146 aaPredicted RBP13.09□□□□□ -0.31
VPS33B-208ENST00000574755 TGFBR1P36897 503 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 PCYT1AP49585 367 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 SMSP52788 366 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 RACK1P63244 317 aaKnown RBP13.09□□□□□ -0.31
VPS33B-208ENST00000574755 MLLT1Q03111 559 aaPredicted RBP13.09□□□□□ -0.31
VPS33B-208ENST00000574755 DGUOKQ16854 277 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 LRIT3Q3SXY7 679 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 ZCCHC12Q6PEW1 402 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 BCDIN3DQ7Z5W3 292 aaKnown RBP13.09□□□□□ -0.31
VPS33B-208ENST00000574755 NKAIN4Q8IVV8 208 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 ARHGEF39Q8N4T4 335 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 WDR36Q8NI36 951 aaKnown RBP13.09□□□□□ -0.31
VPS33B-208ENST00000574755 TEX47Q8TBZ9 253 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 FAM46AQ96IP4 442 aaKnown RBP13.09□□□□□ -0.31
VPS33B-208ENST00000574755 STACQ99469 402 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 ARMC7Q9H6L4 198 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 CAPN10Q9HC96 672 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 HCN3Q9P1Z3 774 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 MYO15AQ9UKN7 3530 aa13.09□□□□□ -0.31
VPS33B-208ENST00000574755 TRIOBPQ9H2D6 2365 aa13.08□□□□□ -0.31
VPS33B-208ENST00000574755 PRKYO43930 277 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 SRPX2O60687 465 aaPredicted RBP13.08□□□□□ -0.32
VPS33B-208ENST00000574755 NADKO95544 446 aaPredicted RBP13.08□□□□□ -0.32
VPS33B-208ENST00000574755 ADRA2AP08913 450 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 SLC35E2P0CK97 266 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 C21orf59P57076 290 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 EEF1A1P68104 462 aaKnown RBP13.08□□□□□ -0.32
VPS33B-208ENST00000574755 CDK5Q00535 292 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 MGAT2Q10469 447 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 SLC13A2Q13183 592 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 ARMCX4Q5H9R4 360 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 MFSD4BQ5TF39 518 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 ACSM5Q6NUN0 579 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 FIGNL1Q6PIW4 674 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 ZNF367Q7RTV3 350 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 ADCK1Q86TW2 530 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 KIF18BQ86Y91 864 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 VWA5B2Q8N398 1253 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 CADM4Q8NFZ8 388 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 PIGXQ8TBF5 258 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 DYNC2LI1Q8TCX1 351 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 ACOT11Q8WXI4 607 aaPredicted RBP13.08□□□□□ -0.32
VPS33B-208ENST00000574755 CTHRC1Q96CG8 243 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 ZHX1-C8orf76Q96EF9 292 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 TCTN2Q96GX1 697 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 SLC41A3Q96GZ6 507 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 POLDIP3Q9BY77 421 aaKnown RBP13.08□□□□□ -0.32
VPS33B-208ENST00000574755 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.08□□□□□ -0.32
VPS33B-208ENST00000574755 PLA2G12AQ9BZM1 189 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 TBC1D23Q9NUY8 699 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 FBXO34Q9NWN3 711 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 IRAK4Q9NWZ3 460 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 FBXL21Q9UKT6 434 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 RPL36Q9Y3U8 105 aaKnown RBP13.08□□□□□ -0.32
VPS33B-208ENST00000574755 SPTBP11277 2137 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 CDC123O75794 336 aaPredicted RBP13.08□□□□□ -0.32
VPS33B-208ENST00000574755 DBIP07108 87 aaKnown RBP13.08□□□□□ -0.32
VPS33B-208ENST00000574755 GADD45AP24522 165 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 GABRA3P34903 492 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 SERPINB10P48595 397 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 SKP1P63208 163 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 ZNF155Q12901 538 aaPredicted RBP13.08□□□□□ -0.32
VPS33B-208ENST00000574755 TSPAN31Q12999 210 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 MAPK14Q16539 360 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 PRTGQ2VWP7 1150 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 DEFB133Q30KQ1 61 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 SLC27A4Q6P1M0 643 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 DGAT2L6Q6ZPD8 337 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 SLC46A3Q7Z3Q1 461 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 GDF7Q7Z4P5 450 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 C11orf74Q86VG3 221 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 SLC15A4Q8N697 577 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 HSPBAP1Q96EW2 488 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 HSPA12BQ96MM6 686 aa13.08□□□□□ -0.32
VPS33B-208ENST00000574755 ZBTB20Q9HC78 741 aaPredicted RBP13.08□□□□□ -0.32
VPS33B-208ENST00000574755 NPIPA5A0A0B4J1W7 369 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 NPIPA7E9PJI5 369 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 PEX12O00623 359 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 OR5F1O95221 314 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 MED26O95402 600 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 NPIPA8P0DM63 369 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 DBTP11182 482 aaKnown RBP13.07□□□□□ -0.32
VPS33B-208ENST00000574755 OMPP47874 163 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 RGS6P49758 472 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 ZNF91Q05481 1191 aa13.07□□□□□ -0.32
VPS33B-208ENST00000574755 SRSF5Q13243 272 aaKnown RBP13.07□□□□□ -0.32
VPS33B-208ENST00000574755 SNAPC1Q16533 368 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms