RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 ATAD3BQ5T9A4 648 aa11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 ZNF324BQ6AW86 544 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 BLOC1S3Q6QNY0 202 aa11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 PIK3R3Q92569 461 aa11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 SPDL1Q96EA4 605 aa11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 NEURL3Q96EH8 262 aa11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 C16orf58Q96GQ5 468 aa11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 JSRP1Q96MG2 331 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 TTTY12Q9BZ98 90 aa11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 ZFP64Q9NPA5 681 aa11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 SDHAF3Q9NRP4 125 aa11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 TUBA8Q9NY65 449 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 SEC14L3Q9UDX4 400 aa11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 ABCG2Q9UNQ0 655 aa11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 GXYLT2A0PJZ3 443 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 NPIPA5E9PKD4 350 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 ASNA1O43681 348 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 ICOSLGO75144 302 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 KCNK2O95069 426 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 ZCCHC18P0CG32 403 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 CYP4B1P13584 511 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 HPGDP15428 266 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 EVI2BP34910 448 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 RFC3P40938 356 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 MAGEA8P43361 318 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 KHKP50053 298 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 HYAL4Q2M3T9 481 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 EXOSC6Q5RKV6 272 aaKnown RBP11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 SAXO2Q658L1 398 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 GFRALQ6UXV0 394 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 CPLX4Q7Z7G2 160 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 GHDCQ8N2G8 530 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 FAM109AQ8N4B1 249 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 OR1J4Q8NGS1 313 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 MIPOL1Q8TD10 442 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 TSPEARQ8WU66 669 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 CDS1Q92903 461 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 VPS33AQ96AX1 596 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 TMEM41AQ96HV5 264 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 GPR137Q96N19 417 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 OR7D2Q96RA2 312 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 NODALQ96S42 347 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 INPP5KQ9BT40 448 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 TBL1XR1Q9BZK7 514 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 RAD21L1Q9H4I0 556 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 QPCTLQ9NXS2 382 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 NPIPA1Q9UND3 350 aa11.7□□□□□ -0.54
TRAPPC1-206ENST00000573989 GTF3C1Q12789 2109 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 A0A0G2JMM0 328 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 A0A1W2PP18 115 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 A0A1W2PPB8 328 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 A0A1W2PRS3 328 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 GMNCA6NCL1 334 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 KIR3DP1A8MWS1 328 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 ANGPT2O15123 496 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 TRIM3O75382 744 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 GLSO94925 669 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 UNC5CO95185 931 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 WISP1O95388 367 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 UTS2O95399 124 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 CBX6O95503 412 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 LSP1P33241 339 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 ZFP36L2P47974 494 aaKnown RBP11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 MAN2A2P49641 1150 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 TDGF1P3P51864 188 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 GNGT1P63211 74 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 FOXO1Q12778 655 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 SLC10A1Q14973 349 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 MAPRE2Q15555 327 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 DCST2Q5T1A1 773 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 BICRALQ6AI39 1079 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 CGB2Q6NT52 195 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 C16orf62Q7Z3J2 963 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 FUNDC1Q8IVP5 155 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 ZNF527Q8NB42 609 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 FAM110BQ8TC76 370 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 PHF12Q96QT6 1004 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 HOXD1Q9GZZ0 328 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 OR51I1Q9H343 314 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 SERHLQ9NQF3 203 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 THUMPD1Q9NXG2 353 aaKnown RBP11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 WIF1Q9Y5W5 379 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 SPENQ96T58 3664 aaKnown RBP11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 FREM3P0C091 2139 aa11.69□□□□□ -0.54
TRAPPC1-206ENST00000573989 DNAJC13O75165 2243 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 A0A096LPI6 279 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 PINLYPA6NC86 204 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 TMEM247A6NEH6 219 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 FAM166BA8MTA8 275 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 SCDO00767 359 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 SNPHO15079 494 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 CDC40O60508 579 aaKnown RBP eCLIP11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 CCDC22O60826 627 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 CBR3O75828 277 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 GSNP06396 782 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 NGFRP08138 427 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 OR12D1P0DN82 309 aa11.68□□□□□ -0.54
TRAPPC1-206ENST00000573989 PPIBP23284 216 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms