RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 TRMT61BQ9BVS5 477 aaKnown RBP17.86■□□□□ 0.45
SCARF1-206ENST00000573852 EXOGQ9Y2C4 368 aaKnown RBP17.86■□□□□ 0.45
SCARF1-206ENST00000573852 ASB4Q9Y574 426 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 ISM1B1AKI9 464 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 C1QBP02746 253 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 PCCBP05166 539 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 HTR2BP41595 481 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 TNK1Q13470 666 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 SLC9A5Q14940 896 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 KLBQ86Z14 1044 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 SFXN5Q8TD22 340 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 WFIKKN2Q8TEU8 576 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 GFM1Q96RP9 751 aaKnown RBP17.85■□□□□ 0.45
SCARF1-206ENST00000573852 SECISBP2Q96T21 854 aaKnown RBP17.85■□□□□ 0.45
SCARF1-206ENST00000573852 COQ7Q99807 217 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 TRIM45Q9H8W5 580 aaPredicted RBP17.85■□□□□ 0.45
SCARF1-206ENST00000573852 MCUBQ9NWR8 336 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 CSNK1G3Q9Y6M4 447 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 A0A0X1KG70 313 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 SYT5O00445 386 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 TRIM3O75382 744 aaPredicted RBP17.85■□□□□ 0.45
SCARF1-206ENST00000573852 IGHA1P01876 353 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 THY1P04216 161 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 GAAP10253 952 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 PTNP21246 168 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 PTBP1P26599 531 aaKnown RBP eCLIP17.85■□□□□ 0.45
SCARF1-206ENST00000573852 BCL6P41182 706 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 ANXA11P50995 505 aaKnown RBP17.85■□□□□ 0.45
SCARF1-206ENST00000573852 SNRPD2P62316 118 aaKnown RBP17.85■□□□□ 0.45
SCARF1-206ENST00000573852 ST3GAL3Q11203 375 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 SF3A2Q15428 464 aaKnown RBP17.85■□□□□ 0.45
SCARF1-206ENST00000573852 PLPP4Q5VZY2 271 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 C18orf63Q68DL7 685 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 MZT2AQ6P582 158 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 NR2C2APQ86WQ0 139 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 WACQ9BTA9 647 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 BTBD1Q9H0C5 482 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 NIPAL2Q9H841 368 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 GALNT9Q9HCQ5 603 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 SLC13A4Q9UKG4 626 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 CBLCQ9ULV8 474 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 TMA7Q9Y2S6 64 aaKnown RBP17.85■□□□□ 0.45
SCARF1-206ENST00000573852 SOCS6O14544 535 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 PLOD3O60568 738 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 FGF19O95750 216 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 GNRH1P01148 92 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 ELK1P19419 428 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 AGFG1P52594 562 aaKnown RBP17.85■□□□□ 0.45
SCARF1-206ENST00000573852 PRDX1Q06830 199 aaKnown RBP17.85■□□□□ 0.45
SCARF1-206ENST00000573852 ACSM1Q08AH1 577 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 BHLHB9Q6PI77 547 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 ADAMTSL4Q6UY14 1074 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 CXorf40AQ8TE69 158 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 DEDD2Q8WXF8 326 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 OSTF1Q92882 214 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 CHFRQ96EP1 664 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 IRF2BPLQ9H1B7 796 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 ISG20L2Q9H9L3 353 aaKnown RBP17.85■□□□□ 0.45
SCARF1-206ENST00000573852 IL20Q9NYY1 176 aa17.85■□□□□ 0.45
SCARF1-206ENST00000573852 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.85■□□□□ 0.45
SCARF1-206ENST00000573852 SGK494L7N484 410 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 ERI3O43414 337 aaKnown RBP17.84■□□□□ 0.45
SCARF1-206ENST00000573852 PIP5K1CO60331 668 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 SLC43A1O75387 559 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 ARSBP15848 533 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 RAB25P57735 213 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 RRAS2P62070 204 aaPredicted RBP17.84■□□□□ 0.45
SCARF1-206ENST00000573852 PLCZ1Q86YW0 608 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 OR2A1Q8NGT9 310 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 FERD3LQ96RJ6 166 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 ZDHHC4Q9NPG8 344 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 POLHQ9Y253 713 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 CDH10Q9Y6N8 788 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 EDDM13A0A1B0GTR0 161 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 ANTXRLA6NF34 631 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 SLC9A3R1O14745 358 aaPredicted RBP17.84■□□□□ 0.45
SCARF1-206ENST00000573852 CHST10O43529 356 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 ZIC2O95409 532 aaPredicted RBP17.84■□□□□ 0.45
SCARF1-206ENST00000573852 AIFM1O95831 613 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 SLC35G4P0C7Q5 338 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 CSF2RAP15509 400 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 CEBPBP17676 345 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 FPR3P25089 353 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 ITGB8P26012 769 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 HTR1FP30939 366 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 ATP6V1E1P36543 226 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 STAT5AP42229 794 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 INPP1P49441 399 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 CDK3Q00526 305 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 TGM3Q08188 693 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 ELAVL3Q14576 367 aaKnown RBP17.84■□□□□ 0.45
SCARF1-206ENST00000573852 MLF2Q15773 248 aaPredicted RBP17.84■□□□□ 0.45
SCARF1-206ENST00000573852 PGGHGQ32M88 737 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 ZNF57Q68EA5 555 aaPredicted RBP17.84■□□□□ 0.45
SCARF1-206ENST00000573852 LAMTOR1Q6IAA8 161 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 ZNF322Q6U7Q0 402 aaPredicted RBP17.84■□□□□ 0.45
SCARF1-206ENST00000573852 NRMQ8IXM6 262 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 SIRT6Q8N6T7 355 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 ACOT4Q8N9L9 421 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 OR56A1Q8NGH5 318 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms