RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 EMC8O43402 210 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 LILRB3O75022 631 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 F8A1P23610 371 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 PKLRP30613 574 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 TRIM23P36406 574 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 DECR1Q16698 335 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 ZNF322Q6U7Q0 402 aaPredicted RBP10.09□□□□□ -0.79
CCDC40-207ENST00000572253 ASB18Q6ZVZ8 466 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 KCTD12Q96CX2 325 aaKnown RBP10.09□□□□□ -0.79
CCDC40-207ENST00000572253 EQTNQ9NQ60 294 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 LHX9Q9NQ69 397 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 NLGN3Q9NZ94 848 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 ZFR2Q9UPR6 939 aaKnown RBP10.09□□□□□ -0.79
CCDC40-207ENST00000572253 EXOGQ9Y2C4 368 aaKnown RBP10.09□□□□□ -0.79
CCDC40-207ENST00000572253 GTPBP1O00178 669 aaKnown RBP10.09□□□□□ -0.79
CCDC40-207ENST00000572253 AKR7A2O43488 359 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 FGF18O76093 207 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 LALBAP00709 142 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 VASPP50552 380 aaPredicted RBP10.09□□□□□ -0.79
CCDC40-207ENST00000572253 RNF144AP50876 292 aaPredicted RBP10.09□□□□□ -0.79
CCDC40-207ENST00000572253 BDH1Q02338 343 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 FAM214AQ32MH5 1076 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 HBMQ6B0K9 141 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 LILRA6Q6PI73 481 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 CCDC116Q8IYX3 515 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 ACBD7Q8N6N7 88 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 OR52L1Q8NGH7 329 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 ARRDC3Q96B67 414 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 NACC2Q96BF6 587 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 KCNJ15Q99712 375 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 ARHGDIGQ99819 225 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 RNF32Q9H0A6 362 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 ABCG5Q9H222 651 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 PIGUQ9H490 435 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 SEMA4GQ9NTN9 838 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 GSAPA4D1B5 854 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 FRS3O43559 492 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 ALPPL2P10696 532 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 ERGP11308 486 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 ADRB3P13945 408 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 NDUFV2P19404 249 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 ELK1P19419 428 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 KRT33BQ14525 404 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 ZNF77Q15935 545 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 ANKRD54Q6NXT1 300 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 CXXC5Q7LFL8 322 aaKnown RBP10.08□□□□□ -0.8
CCDC40-207ENST00000572253 ZNF485Q8NCK3 441 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 TMIEQ8NEW7 156 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 TOR1AIP2Q8NFQ8 470 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 OR51G2Q8NGK0 314 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 FERD3LQ96RJ6 166 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 MCHR1Q99705 422 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 PRR14Q9BWN1 585 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 TRIM36Q9NQ86 728 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 CBLCQ9ULV8 474 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 DNMT3AQ9Y6K1 912 aaPredicted RBP10.08□□□□□ -0.8
CCDC40-207ENST00000572253 MAN2B1O00754 1011 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 ERI3O43414 337 aaKnown RBP10.08□□□□□ -0.8
CCDC40-207ENST00000572253 RNF13O43567 381 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 RFPL3O75679 317 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 IGHA1P01876 353 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 STOMP27105 288 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 MPIP34949 423 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 GPR4P46093 362 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 CSNK1G2P78368 415 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 GPR176Q14439 515 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 CEP78Q5JTW2 689 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 FAM209AQ5JX71 171 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 PIP5KL1Q5T9C9 394 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 HACD4Q5VWC8 232 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 TMEM107Q6UX40 140 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 UBE3DQ7Z6J8 389 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 AMIGO1Q86WK6 493 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 NRMQ8IXM6 262 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 OR5M3Q8NGP4 307 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 DIO2Q92813 273 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 ART5Q96L15 291 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 NECTIN4Q96NY8 510 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 THAP7Q9BT49 309 aaPredicted RBP10.08□□□□□ -0.8
CCDC40-207ENST00000572253 QRSL1Q9H0R6 528 aaKnown RBP10.08□□□□□ -0.8
CCDC40-207ENST00000572253 ZNF222Q9UK12 451 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 ABHD14A-ACY1A0A1B0GW23 586 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 EPPINO95925 133 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 FAM157BP0CG42 384 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 RBMS1P29558 406 aaKnown RBP10.08□□□□□ -0.8
CCDC40-207ENST00000572253 OMPP47874 163 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 TLE2Q04725 743 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 TRAM1Q15629 374 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 KRT74Q7RTS7 529 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 VRK2Q86Y07 508 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 CPOQ8IVL8 374 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 NUP43Q8NFH3 380 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 OR4Q3Q8NH05 313 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 ADAMTS15Q8TE58 950 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 UCN3Q969E3 161 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 DACT3Q96B18 629 aaPredicted RBP10.08□□□□□ -0.8
CCDC40-207ENST00000572253 OR7D2Q96RA2 312 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 DPAGT1Q9H3H5 408 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 RANBP3Q9H6Z4 567 aaPredicted RBP10.08□□□□□ -0.8
CCDC40-207ENST00000572253 BABAM2Q9NXR7 383 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms