RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 OR2Y1Q8NGV0 311 aa20.34■□□□□ 0.85
LINC01960-201ENST00000563759 OR52P1PQ8NH57 321 aa20.34■□□□□ 0.85
LINC01960-201ENST00000563759 C8orf44Q96CB5 159 aa20.34■□□□□ 0.85
LINC01960-201ENST00000563759 PINK1Q9BXM7 581 aa20.34■□□□□ 0.85
LINC01960-201ENST00000563759 THSD1Q9NS62 852 aa20.34■□□□□ 0.85
LINC01960-201ENST00000563759 FBXO34Q9NWN3 711 aa20.34■□□□□ 0.85
LINC01960-201ENST00000563759 SLC13A4Q9UKG4 626 aa20.34■□□□□ 0.85
LINC01960-201ENST00000563759 GPR55Q9Y2T6 319 aaPredicted RBP20.34■□□□□ 0.85
LINC01960-201ENST00000563759 PTPRZ1P23471 2315 aaPredicted RBP20.34■□□□□ 0.85
LINC01960-201ENST00000563759 C2orf92A0A1B0GVN3 265 aa20.33■□□□□ 0.85
LINC01960-201ENST00000563759 PEX1O43933 1283 aa20.33■□□□□ 0.85
LINC01960-201ENST00000563759 E2F6O75461 281 aa20.33■□□□□ 0.85
LINC01960-201ENST00000563759 SEC24DO94855 1032 aaPredicted RBP20.33■□□□□ 0.85
LINC01960-201ENST00000563759 TNFSF15O95150 251 aa20.33■□□□□ 0.85
LINC01960-201ENST00000563759 CD63P08962 238 aa20.33■□□□□ 0.85
LINC01960-201ENST00000563759 CEACAM1P13688 526 aa20.33■□□□□ 0.85
LINC01960-201ENST00000563759 ITGA2P17301 1181 aa20.33■□□□□ 0.85
LINC01960-201ENST00000563759 PIGAP37287 484 aa20.33■□□□□ 0.85
LINC01960-201ENST00000563759 NHLH1Q02575 133 aa20.33■□□□□ 0.85
LINC01960-201ENST00000563759 EBPQ15125 230 aaKnown RBP20.33■□□□□ 0.85
LINC01960-201ENST00000563759 FLYWCH1Q4VC44 716 aa20.33■□□□□ 0.85
LINC01960-201ENST00000563759 OR2T5Q6IEZ7 315 aa20.33■□□□□ 0.85
LINC01960-201ENST00000563759 TIPARPQ7Z3E1 657 aaKnown RBP20.33■□□□□ 0.85
LINC01960-201ENST00000563759 TMPRSS12Q86WS5 348 aa20.33■□□□□ 0.85
LINC01960-201ENST00000563759 VRK2Q86Y07 508 aa20.33■□□□□ 0.85
LINC01960-201ENST00000563759 C9orf40Q8IXQ3 194 aa20.33■□□□□ 0.85
LINC01960-201ENST00000563759 OR2T29Q8NH02 315 aa20.33■□□□□ 0.85
LINC01960-201ENST00000563759 TMBIM1Q969X1 311 aa20.33■□□□□ 0.85
LINC01960-201ENST00000563759 ZG16BQ96DA0 208 aa20.33■□□□□ 0.85
LINC01960-201ENST00000563759 G6PC3Q9BUM1 346 aa20.33■□□□□ 0.85
LINC01960-201ENST00000563759 OR6C76A6NM76 312 aa20.33■□□□□ 0.84
LINC01960-201ENST00000563759 DLL1O00548 723 aa20.33■□□□□ 0.84
LINC01960-201ENST00000563759 KLF7O75840 302 aaPredicted RBP20.33■□□□□ 0.84
LINC01960-201ENST00000563759 PRSS23O95084 383 aa20.33■□□□□ 0.84
LINC01960-201ENST00000563759 IL7RP16871 459 aa20.33■□□□□ 0.84
LINC01960-201ENST00000563759 PPICP45877 212 aa20.33■□□□□ 0.84
LINC01960-201ENST00000563759 EPHX4Q8IUS5 362 aa20.33■□□□□ 0.84
LINC01960-201ENST00000563759 KBTBD2Q8IY47 623 aa20.33■□□□□ 0.84
LINC01960-201ENST00000563759 VANGL1Q8TAA9 524 aaPredicted RBP20.33■□□□□ 0.84
LINC01960-201ENST00000563759 C9orf16Q9BUW7 83 aa20.33■□□□□ 0.84
LINC01960-201ENST00000563759 RSPO3Q9BXY4 272 aaPredicted RBP20.33■□□□□ 0.84
LINC01960-201ENST00000563759 WWTR1Q9GZV5 400 aa20.33■□□□□ 0.84
LINC01960-201ENST00000563759 NTN4Q9HB63 628 aa20.33■□□□□ 0.84
LINC01960-201ENST00000563759 SLC9A8Q9Y2E8 581 aa20.33■□□□□ 0.84
LINC01960-201ENST00000563759 IFT52Q9Y366 437 aa20.33■□□□□ 0.84
LINC01960-201ENST00000563759 UMODP07911 640 aa20.32■□□□□ 0.84
LINC01960-201ENST00000563759 TCN2P20062 427 aa20.32■□□□□ 0.84
LINC01960-201ENST00000563759 PUM1Q14671 1186 aaKnown RBP eCLIP20.32■□□□□ 0.84
LINC01960-201ENST00000563759 LARS2Q15031 903 aaKnown RBP20.32■□□□□ 0.84
LINC01960-201ENST00000563759 ZBTB49Q6ZSB9 765 aa20.32■□□□□ 0.84
LINC01960-201ENST00000563759 CARM1Q86X55 608 aa20.32■□□□□ 0.84
LINC01960-201ENST00000563759 ESX1Q8N693 406 aa20.32■□□□□ 0.84
LINC01960-201ENST00000563759 CT55Q8WUE5 264 aa20.32■□□□□ 0.84
LINC01960-201ENST00000563759 SDCCAG3Q96C92 435 aa20.32■□□□□ 0.84
LINC01960-201ENST00000563759 LCORQ96JN0 433 aaPredicted RBP20.32■□□□□ 0.84
LINC01960-201ENST00000563759 ZNF184Q99676 751 aaPredicted RBP20.32■□□□□ 0.84
LINC01960-201ENST00000563759 SAP130Q9H0E3 1048 aa20.32■□□□□ 0.84
LINC01960-201ENST00000563759 NXF5Q9H1B4 397 aaKnown RBP20.32■□□□□ 0.84
LINC01960-201ENST00000563759 NDUFAF4Q9P032 175 aa20.32■□□□□ 0.84
LINC01960-201ENST00000563759 ZNF232Q9UNY5 417 aa20.32■□□□□ 0.84
LINC01960-201ENST00000563759 ZNF443Q9Y2A4 671 aaPredicted RBP20.32■□□□□ 0.84
LINC01960-201ENST00000563759 AK5Q9Y6K8 562 aa20.32■□□□□ 0.84
LINC01960-201ENST00000563759 U3KQV3 271 aa20.32■□□□□ 0.84
LINC01960-201ENST00000563759 EXPH5Q8NEV8 1989 aa20.31■□□□□ 0.84
LINC01960-201ENST00000563759 NPIPA5A0A0B4J1W7 369 aa20.31■□□□□ 0.84
LINC01960-201ENST00000563759 PRAMEF25A6NGN4 478 aa20.31■□□□□ 0.84
LINC01960-201ENST00000563759 FRG2CA6NGY1 282 aa20.31■□□□□ 0.84
LINC01960-201ENST00000563759 AGAP5A6NIR3 686 aa20.31■□□□□ 0.84
LINC01960-201ENST00000563759 NPIPA7E9PJI5 369 aa20.31■□□□□ 0.84
LINC01960-201ENST00000563759 PRKNO60260 465 aaPredicted RBP20.31■□□□□ 0.84
LINC01960-201ENST00000563759 CAPNS1P04632 268 aa20.31■□□□□ 0.84
LINC01960-201ENST00000563759 DBIP07108 87 aaKnown RBP20.31■□□□□ 0.84
LINC01960-201ENST00000563759 NPIPA8P0DM63 369 aa20.31■□□□□ 0.84
LINC01960-201ENST00000563759 PRKAR1BP31321 381 aa20.31■□□□□ 0.84
LINC01960-201ENST00000563759 DCAF7P61962 342 aa20.31■□□□□ 0.84
LINC01960-201ENST00000563759 GALNT4Q8N4A0 578 aa20.31■□□□□ 0.84
LINC01960-201ENST00000563759 BCORP1Q8N888 145 aa20.31■□□□□ 0.84
LINC01960-201ENST00000563759 APOBEC4Q8WW27 367 aaKnown RBP20.31■□□□□ 0.84
LINC01960-201ENST00000563759 PMM1Q92871 262 aa20.31■□□□□ 0.84
LINC01960-201ENST00000563759 ZNF300Q96RE9 604 aaPredicted RBP20.31■□□□□ 0.84
LINC01960-201ENST00000563759 ZNF347Q96SE7 839 aa20.31■□□□□ 0.84
LINC01960-201ENST00000563759 WDR77Q9BQA1 342 aaPredicted RBP20.31■□□□□ 0.84
LINC01960-201ENST00000563759 AMBRA1Q9C0C7 1298 aa20.31■□□□□ 0.84
LINC01960-201ENST00000563759 COQ10BQ9H8M1 238 aa20.31■□□□□ 0.84
LINC01960-201ENST00000563759 FAM32AQ9Y421 112 aaKnown RBP20.31■□□□□ 0.84
LINC01960-201ENST00000563759 PDLIM1O00151 329 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 PEX12O00623 359 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 IGKV1D-16P01601 117 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 YAP1P46937 504 aaKnown RBP20.3■□□□□ 0.84
LINC01960-201ENST00000563759 IST1P53990 364 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 DECR1Q16698 335 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 LIN52Q52LA3 116 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 ZAR1Q86SH2 424 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 CACTIN-AS1Q8N1I8 211 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 CBR4Q8N4T8 237 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 APCDD1LQ8NCL9 501 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 NFAM1Q8NET5 270 aaPredicted RBP20.3■□□□□ 0.84
LINC01960-201ENST00000563759 DNAJC9Q8WXX5 260 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 ADIPOR1Q96A54 375 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 VMP1Q96GC9 406 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms