RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 S100A8P05109 93 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 PROS1P07225 676 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 FGF2P09038 288 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 IFI30P13284 250 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 ZNF250P15622 560 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 UGT2B7P16662 529 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 HOXB9P17482 250 aaPredicted RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 MAGP20916 626 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 SAT1P21673 171 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 PPIBP23284 216 aaKnown RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 HMGB2P26583 209 aaKnown RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 MAPK3P27361 379 aaPredicted RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 EVI2BP34910 448 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 GRK5P34947 590 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 MMP12P39900 470 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 HAAOP46952 286 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 SULT1E1P49888 294 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 DIO3P55073 304 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 TPI1P60174 286 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 CDC42P60953 191 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 SNRPGP62308 76 aaKnown RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 UBXN2AP68543 259 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 E2F1Q01094 437 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 ZNF91Q05481 1191 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 LRRC74AQ0VAA2 488 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 EXOSC2Q13868 293 aaKnown RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 C1DQ13901 141 aaKnown RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 CAPSQ13938 189 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 SIM2Q14190 667 aaPredicted RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 VEPH1Q14D04 833 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 MAPKAPK3Q16644 382 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 TSTQ16762 297 aaKnown RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 GTDC1Q4AE62 458 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 SPIN4Q56A73 249 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 PYDC2Q56P42 97 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 PABPC1L2AQ5JQF8 200 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 PLAG1Q6DJT9 500 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 KDELC1Q6UW63 502 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 IKBIPQ70UQ0 350 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 PHC2Q8IXK0 858 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 ADGRF3Q8IZF5 1079 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 LIX1Q8N485 282 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 LRRC52Q8N7C0 313 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 NRACQ8N912 160 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 PROKR2Q8NFJ6 384 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 OR2T4Q8NH00 348 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 IL31RAQ8NI17 732 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 TEX47Q8TBZ9 253 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 ATOH1Q92858 354 aaPredicted RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 SGK3Q96BR1 496 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 PHF21BQ96EK2 531 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 FAM120BQ96EK7 910 aaKnown RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 WBP1Q96G27 269 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 SCMH1Q96GD3 660 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 HPDLQ96IR7 371 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 ITCHQ96J02 903 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 FOPNLQ96NB1 174 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 TRIB3Q96RU7 358 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 NPY6RQ99463 290 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 KCNS3Q9BQ31 491 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 TCEAL7Q9BRU2 100 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 TRIM62Q9BVG3 475 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 REG4Q9BYZ8 158 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 ALG9Q9H6U8 611 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 PPP1R3EQ9H7J1 279 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 UCK1Q9HA47 277 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 ITM2CQ9NQX7 267 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 BIN3Q9NQY0 253 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 ZNF302Q9NR11 478 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 PRMT7Q9NVM4 692 aaPredicted RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 CLN6Q9NWW5 311 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 HPF1Q9NWY4 346 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 SDHAF2Q9NX18 166 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 MIOSQ9NXC5 875 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 RDH8Q9NYR8 311 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 TAS2R13Q9NYV9 303 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 NUDT4Q9NZJ9 180 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 PDP1Q9P0J1 537 aaPredicted RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 AGO1Q9UL18 857 aaKnown RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 MGAT4AQ9UM21 535 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 TMEM5Q9Y2B1 443 aa3.3□□□□□ -1.88
LINC01416-201ENST00000563553 LSM2Q9Y333 95 aaKnown RBP3.3□□□□□ -1.88
LINC01416-201ENST00000563553 ANKRD36A6QL64 1941 aa3.29□□□□□ -1.88
LINC01416-201ENST00000563553 RALGAPA2Q2PPJ7 1873 aa3.29□□□□□ -1.88
LINC01416-201ENST00000563553 LOC285095A0A1B0GVY8 99 aa3.29□□□□□ -1.88
LINC01416-201ENST00000563553 TMEM150BA6NC51 233 aa3.29□□□□□ -1.88
LINC01416-201ENST00000563553 ANKRD61A6NGH8 418 aa3.29□□□□□ -1.88
LINC01416-201ENST00000563553 DDTLA6NHG4 134 aaPredicted RBP3.29□□□□□ -1.88
LINC01416-201ENST00000563553 ANKDD1BA6NHY2 528 aa3.29□□□□□ -1.88
LINC01416-201ENST00000563553 CACNB4O00305 520 aaPredicted RBP3.29□□□□□ -1.88
LINC01416-201ENST00000563553 PCDH17O14917 1159 aa3.29□□□□□ -1.88
LINC01416-201ENST00000563553 RGS14O43566 566 aa3.29□□□□□ -1.88
LINC01416-201ENST00000563553 SLC28A2O43868 658 aa3.29□□□□□ -1.88
LINC01416-201ENST00000563553 RAD1O60671 282 aa3.29□□□□□ -1.88
LINC01416-201ENST00000563553 MITFO75030 526 aaPredicted RBP3.29□□□□□ -1.88
LINC01416-201ENST00000563553 GPX5O75715 221 aa3.29□□□□□ -1.88
LINC01416-201ENST00000563553 GLUD1P00367 558 aa3.29□□□□□ -1.88
LINC01416-201ENST00000563553 PTHP01270 115 aa3.29□□□□□ -1.88
LINC01416-201ENST00000563553 ACSM4P0C7M7 580 aa3.29□□□□□ -1.88
LINC01416-201ENST00000563553 LINC00032P0C843 101 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms