RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 YTHDF3Q7Z739 585 aaKnown RBP11.73□□□□□ -0.53
SF3B3-202ENST00000562722 OR7G2Q8NG99 324 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 OR5M1Q8NGP8 315 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 C16orf78Q8WTQ4 265 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 IFT81Q8WYA0 676 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 FIG4Q92562 907 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 PERPQ96FX8 193 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 Q96MF0 132 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 C1QTNF3Q9BXJ4 246 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 PINK1Q9BXM7 581 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 ACPTQ9BZG2 426 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 TSPYL1Q9H0U9 437 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 PTGES2Q9H7Z7 377 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 SLC35C2Q9NQQ7 365 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 SDHAF3Q9NRP4 125 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 MED11Q9P086 117 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 ZNF225Q9UK10 706 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 CCDC151A5D8V7 595 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 DEFB108AA8MXU0 73 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 C16orf97H3BN30 126 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 LY6G6DO95868 133 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 ANXA4P09525 319 aaPredicted RBP11.72□□□□□ -0.53
SF3B3-202ENST00000562722 SBK3P0C264 359 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 FPR1P21462 350 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 TIA1P31483 386 aaKnown RBP eCLIP11.72□□□□□ -0.53
SF3B3-202ENST00000562722 UGT2B10P36537 528 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 MC3RP41968 323 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 NCBP2P52298 156 aaKnown RBP eCLIP11.72□□□□□ -0.53
SF3B3-202ENST00000562722 GAS1P54826 345 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 B3GALT5-AS1P59052 145 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 RAE1P78406 368 aaKnown RBP11.72□□□□□ -0.53
SF3B3-202ENST00000562722 ACKR1Q16570 336 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 UNC50Q53HI1 259 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 SPDYAQ5MJ70 313 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 ZNF474Q6S9Z5 364 aaPredicted RBP11.72□□□□□ -0.53
SF3B3-202ENST00000562722 ZNF550Q7Z398 422 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 LRRC75A-AS1Q8N1F1 130 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 OR2M3Q8NG83 312 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 DCAKDQ8WVC6 231 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 APIPQ96GX9 242 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 ZNF382Q96SR6 550 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 FMO2Q99518 471 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 PIP5K1AQ99755 562 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 FUT8Q9BYC5 575 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 KLHL4Q9C0H6 718 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 STMN4Q9H169 189 aaPredicted RBP11.72□□□□□ -0.53
SF3B3-202ENST00000562722 MIEF1Q9NQG6 463 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 ELOVL5Q9NYP7 299 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 DMGDHQ9UI17 866 aaKnown RBP11.72□□□□□ -0.53
SF3B3-202ENST00000562722 ZNF180Q9UJW8 692 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 PROCRQ9UNN8 238 aa11.72□□□□□ -0.53
SF3B3-202ENST00000562722 A0A087WUV0 522 aaPredicted RBP11.71□□□□□ -0.53
SF3B3-202ENST00000562722 EXOC1LA0A1B0GW35 172 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 B4DXG7 233 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 H0YC42 278 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 SIAH2O43255 324 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 GMFGO60234 142 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 PLOD3O60568 738 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 JUNP05412 331 aaKnown RBP11.71□□□□□ -0.53
SF3B3-202ENST00000562722 SNRPAP09012 282 aaKnown RBP11.71□□□□□ -0.53
SF3B3-202ENST00000562722 CRYGSP22914 178 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 PCSK6P29122 969 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 KIR2DL2P43627 348 aaPredicted RBP11.71□□□□□ -0.53
SF3B3-202ENST00000562722 HTR6P50406 440 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 TPD52P55327 224 aaPredicted RBP11.71□□□□□ -0.53
SF3B3-202ENST00000562722 RPS3AP61247 264 aaKnown RBP11.71□□□□□ -0.53
SF3B3-202ENST00000562722 FGFBP1Q14512 234 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 GANABQ14697 944 aaKnown RBP11.71□□□□□ -0.53
SF3B3-202ENST00000562722 PON3Q15166 354 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 ZNHIT3Q15649 155 aaPredicted RBP11.71□□□□□ -0.53
SF3B3-202ENST00000562722 SGCBQ16585 318 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 DECR1Q16698 335 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 EXOC3L2Q2M3D2 409 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 ZNF678Q5SXM1 525 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 LGSNQ5TDP6 509 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 ANKRD34AQ69YU3 496 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 TMEM107Q6UX40 140 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 RELL1Q8IUW5 271 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 FADS6Q8N9I5 356 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 FNDC9Q8TBE3 224 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 GFM2Q969S9 779 aaKnown RBP11.71□□□□□ -0.53
SF3B3-202ENST00000562722 COX4I2Q96KJ9 171 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 TMEM237Q96Q45 408 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 PIGQQ9BRB3 760 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 BDH2Q9BUT1 245 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 PRRG4Q9BZD6 226 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 Q9N2J8 555 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 DDX18Q9NVP1 670 aaKnown RBP11.71□□□□□ -0.53
SF3B3-202ENST00000562722 FLRT3Q9NZU0 649 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 STK38LQ9Y2H1 464 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 ZNF337Q9Y3M9 751 aa11.71□□□□□ -0.53
SF3B3-202ENST00000562722 LINC01387J3KSC0 135 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 EMC8O43402 210 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 TNFRSF21O75509 655 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 PLGP00747 810 aaPredicted RBP11.7□□□□□ -0.54
SF3B3-202ENST00000562722 ENO1P06733 434 aaKnown RBP11.7□□□□□ -0.54
SF3B3-202ENST00000562722 FCGR2AP12318 317 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 DDCP20711 480 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 NTSP30990 170 aa11.7□□□□□ -0.54
SF3B3-202ENST00000562722 CCKARP32238 428 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms