RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 WNT5BQ9H1J7 359 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 SLC25A51Q9H1U9 297 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 FZD8Q9H461 694 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 ELP3Q9H9T3 547 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 AMBNQ9NP70 447 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 MYOZ1Q9NP98 299 aaPredicted RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 SEMA4BQ9NPR2 832 aaPredicted RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 MIEF1Q9NQG6 463 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 PRMT8Q9NR22 394 aaPredicted RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 FAM120CQ9NX05 1096 aaKnown RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 ZNF629Q9UEG4 869 aaPredicted RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 TRPS1Q9UHF7 1281 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 CLCA2Q9UQC9 943 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 CAMK2AQ9UQM7 478 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 CHST2Q9Y4C5 530 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 TRPV2Q9Y5S1 764 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 SNX11Q9Y5W9 270 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 SZT2Q5T011 3432 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 BRCA2P51587 3418 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 TCRBV16S1A1N1A0A5B0 115 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 TMEM150BA6NC51 233 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 COLCA2A8K830 154 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 ZNF879B4DU55 563 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 ZNF593O00488 134 aaPredicted RBP6.83□□□□□ -1.32
CDH1-203ENST00000561751 HYAL3O43820 417 aaPredicted RBP6.83□□□□□ -1.32
CDH1-203ENST00000561751 CREBL2O60519 120 aaPredicted RBP6.83□□□□□ -1.32
CDH1-203ENST00000561751 EIF4E2O60573 245 aaKnown RBP6.83□□□□□ -1.32
CDH1-203ENST00000561751 PRKRAO75569 313 aaKnown RBP6.83□□□□□ -1.32
CDH1-203ENST00000561751 KDM4BO94953 1096 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 PEX11BO96011 259 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 ALDOBP05062 364 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 SRPRAP08240 638 aaKnown RBP6.83□□□□□ -1.32
CDH1-203ENST00000561751 GKN3PP0CG01 181 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 RNH1P13489 461 aaKnown RBP6.83□□□□□ -1.32
CDH1-203ENST00000561751 ELK1P19419 428 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 ANXA7P20073 488 aaKnown RBP6.83□□□□□ -1.32
CDH1-203ENST00000561751 PRPS1L1P21108 318 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 FPR3P25089 353 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 CERS1P27544 350 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 CCND3P30281 292 aaPredicted RBP6.83□□□□□ -1.32
CDH1-203ENST00000561751 SOX3P41225 446 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 TNFSF9P41273 254 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 TM4SF4P48230 202 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 CCR9P51686 369 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 CTBP2P56545 445 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 ERVPABLB-1P60509 514 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 RPS14P62263 151 aaKnown RBP6.83□□□□□ -1.32
CDH1-203ENST00000561751 SNRPEP62304 92 aaKnown RBP6.83□□□□□ -1.32
CDH1-203ENST00000561751 RAC1P63000 192 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 EFNB1P98172 346 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 MAT1AQ00266 395 aaKnown RBP6.83□□□□□ -1.32
CDH1-203ENST00000561751 PLIN5Q00G26 463 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 SRSF4Q08170 494 aaKnown RBP6.83□□□□□ -1.32
CDH1-203ENST00000561751 BIKQ13323 160 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 VGLL4Q14135 290 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 HABP2Q14520 560 aaPredicted RBP6.83□□□□□ -1.32
CDH1-203ENST00000561751 SSPNQ14714 243 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 PTPRCAPQ14761 206 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 HEPACAMQ14CZ8 416 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 PEA15Q15121 130 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 PPA1Q15181 289 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 RBBP7Q16576 425 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 SOWAHAQ2M3V2 549 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.83□□□□□ -1.32
CDH1-203ENST00000561751 TMEM255AQ5JRV8 349 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 SPANXN4Q5MJ08 99 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 PRAMEF19Q5SWL8 479 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 IDNKQ5T6J7 187 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 ARMC12Q5T9G4 340 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 AADACL4Q5VUY2 407 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 LIPKQ5VXJ0 399 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 SYPL2Q5VXT5 272 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 ZNF626Q68DY1 528 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 SWSAP1Q6NVH7 229 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 MSANTD2Q6P1R3 559 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 IL27RAQ6UWB1 636 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 PRSS55Q6UWB4 352 aaPredicted RBP6.83□□□□□ -1.32
CDH1-203ENST00000561751 CASP12Q6UXS9 341 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 IL34Q6ZMJ4 242 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 WDR53Q7Z5U6 358 aaPredicted RBP6.83□□□□□ -1.32
CDH1-203ENST00000561751 PLEKHH3Q7Z736 793 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 TAC4Q86UU9 113 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 GPSM1Q86YR5 675 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 SERPINA12Q8IW75 414 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 LGI4Q8N135 537 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 PYROXD2Q8N2H3 581 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 BEND2Q8NDZ0 799 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 OR10K1Q8NGX5 313 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 SLC7A13Q8TCU3 470 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 NELL1Q92832 810 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 VOPP1Q96AW1 172 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 EXOSC8Q96B26 276 aaKnown RBP6.83□□□□□ -1.32
CDH1-203ENST00000561751 TADA1Q96BN2 335 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 TRIM43Q96BQ3 446 aaPredicted RBP6.83□□□□□ -1.32
CDH1-203ENST00000561751 TEFMQ96QE5 360 aaKnown RBP6.83□□□□□ -1.32
CDH1-203ENST00000561751 DDOQ99489 341 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 SSX3Q99909 188 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 PDCD2LQ9BRP1 358 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 CRB3Q9BUF7 120 aa6.83□□□□□ -1.32
CDH1-203ENST00000561751 WRAP53Q9BUR4 548 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms