RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 ARSIQ5FYB1 569 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 PRAMEF8Q5VWM4 474 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 PRAMEF7Q5VXH5 474 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 PYHIN1Q6K0P9 492 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 CRTC1Q6UUV9 634 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 TEX261Q6UWH6 196 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 TMEM107Q6UX40 140 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 ADGRG3Q86Y34 549 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 LAS2Q8IYD9 372 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 NRSN1Q8IZ57 195 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 ADGRF3Q8IZF5 1079 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 NAGSQ8N159 534 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 KLHL36Q8N4N3 616 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 EID2Q8N6I1 236 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 FBXO15Q8NCQ5 510 aaPredicted RBP8.06□□□□□ -1.12
CCDC33-209ENST00000560565 ATP6V1C2Q8NEY4 427 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 OR7G3Q8NG95 312 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 LHFPL5Q8TAF8 219 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 TEX47Q8TBZ9 253 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 ADAMTS14Q8WXS8 1223 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 SORCS1Q8WY21 1168 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 OR5P2Q8WZ92 322 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 UBE2FQ969M7 185 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 GTPBP3Q969Y2 492 aaKnown RBP8.06□□□□□ -1.12
CCDC33-209ENST00000560565 RFT1Q96AA3 541 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 PHF21AQ96BD5 680 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 MTFMTQ96DP5 389 aaKnown RBP8.06□□□□□ -1.12
CCDC33-209ENST00000560565 MRPL48Q96GC5 212 aaKnown RBP8.06□□□□□ -1.12
CCDC33-209ENST00000560565 FYTTD1Q96QD9 318 aaKnown RBP8.06□□□□□ -1.12
CCDC33-209ENST00000560565 MRI1Q9BV20 369 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 HDAC8Q9BY41 377 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 BARHL1Q9BZE3 327 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 PITHD1Q9GZP4 211 aaPredicted RBP8.06□□□□□ -1.12
CCDC33-209ENST00000560565 TMEM168Q9H0V1 697 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 MIR1-1HGQ9H1L0 117 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 SLC6A15Q9H2J7 730 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 FN3KQ9H479 309 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 SERHL2Q9H4I8 314 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 CACYBPQ9HB71 228 aaKnown RBP8.06□□□□□ -1.12
CCDC33-209ENST00000560565 IL26Q9NPH9 171 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 ITM2CQ9NQX7 267 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 UCKL1Q9NWZ5 548 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 PLEKHB1Q9UF11 243 aaPredicted RBP8.06□□□□□ -1.12
CCDC33-209ENST00000560565 SCP2D1Q9UJQ7 156 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 FNDC3AQ9Y2H6 1198 aaKnown RBP8.06□□□□□ -1.12
CCDC33-209ENST00000560565 SPIN1Q9Y657 262 aaPredicted RBP8.06□□□□□ -1.12
CCDC33-209ENST00000560565 U3KQ87 197 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 KNL1Q8NG31 2342 aa8.06□□□□□ -1.12
CCDC33-209ENST00000560565 FRYQ5TBA9 3013 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 TCRBV21S2A2A0A5A6 115 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 GSAPA4D1B5 854 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 NPIPB15A6NHN6 443 aaPredicted RBP8.05□□□□□ -1.12
CCDC33-209ENST00000560565 GABRR3A8MPY1 467 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 LEUTXA8MZ59 168 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 BNIP3LO60238 219 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 MMP20O60882 483 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 ADH1BP00325 375 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 SERPINA3P01011 423 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 RAF1P04049 648 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 ALPIP09923 528 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 ATP1B2P14415 290 aaPredicted RBP8.05□□□□□ -1.12
CCDC33-209ENST00000560565 UGT2B7P16662 529 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 SLC6A1P30531 599 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 UQCRC1P31930 480 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 GKP32189 559 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 ETV3P41162 512 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 SOX3P41225 446 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 SPINT3P49223 89 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 ETV1P50549 477 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 ABATP80404 500 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 SEMG2Q02383 582 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 TAP2Q03519 686 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 SLC14A1Q13336 389 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 C18orf21Q32NC0 220 aaPredicted RBP8.05□□□□□ -1.12
CCDC33-209ENST00000560565 TOR2AQ5JU69 321 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 LIPKQ5VXJ0 399 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 ZNF770Q6IQ21 691 aaPredicted RBP8.05□□□□□ -1.12
CCDC33-209ENST00000560565 CNIH2Q6PI25 160 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 FAM83HQ6ZRV2 1179 aaPredicted RBP8.05□□□□□ -1.12
CCDC33-209ENST00000560565 ZNF765Q7L2R6 523 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 THOC6Q86W42 341 aaKnown RBP8.05□□□□□ -1.12
CCDC33-209ENST00000560565 GID4Q8IVV7 300 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 SLITRK4Q8IW52 837 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 FAM20CQ8IXL6 584 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 C9orf62Q8N4C0 152 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 FAM160A2Q8N612 972 aaPredicted RBP8.05□□□□□ -1.12
CCDC33-209ENST00000560565 OR52J3Q8NH60 311 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 CDC26Q8NHZ8 85 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 NFKBIDQ8NI38 313 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 BBS10Q8TAM1 723 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 HMGB4Q8WW32 186 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 UCN3Q969E3 161 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 NACC2Q96BF6 587 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 MOAP1Q96BY2 351 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 NXPE2Q96DL1 559 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 WDR34Q96EX3 536 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 C11orf24Q96F05 449 aaPredicted RBP8.05□□□□□ -1.12
CCDC33-209ENST00000560565 PDXPQ96GD0 296 aa8.05□□□□□ -1.12
CCDC33-209ENST00000560565 ZC3H10Q96K80 434 aaKnown RBP8.05□□□□□ -1.12
CCDC33-209ENST00000560565 OR4K3Q96R72 315 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms