RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 ZNF395Q9H8N7 513 aaPredicted RBP11.82□□□□□ -0.52
TPM1-220ENST00000559556 SLC35C2Q9NQQ7 365 aa11.82□□□□□ -0.52
TPM1-220ENST00000559556 GIMAP4Q9NUV9 329 aa11.82□□□□□ -0.52
TPM1-220ENST00000559556 ZNF226Q9NYT6 803 aa11.82□□□□□ -0.52
TPM1-220ENST00000559556 TAS2R9Q9NYW1 312 aa11.82□□□□□ -0.52
TPM1-220ENST00000559556 PPP4R1LQ9P1A2 415 aa11.82□□□□□ -0.52
TPM1-220ENST00000559556 ABCG2Q9UNQ0 655 aa11.82□□□□□ -0.52
TPM1-220ENST00000559556 GNG14A0A1W2PPG7 69 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 FADS1O60427 444 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 CHN1P15882 459 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 TCEA1P23193 301 aaKnown RBP11.81□□□□□ -0.52
TPM1-220ENST00000559556 TIA1P31483 386 aaKnown RBP eCLIP11.81□□□□□ -0.52
TPM1-220ENST00000559556 UGT2B10P36537 528 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 KIR2DL2P43627 348 aaPredicted RBP11.81□□□□□ -0.52
TPM1-220ENST00000559556 PSG6Q00889 435 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 ACSM2AQ08AH3 577 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 HEPACAMQ14CZ8 416 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 GUSBP1Q15486 140 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 ZNF678Q5SXM1 525 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 ACSM2BQ68CK6 577 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 GALNT18Q6P9A2 607 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 ZNF474Q6S9Z5 364 aaPredicted RBP11.81□□□□□ -0.52
TPM1-220ENST00000559556 PRSS57Q6UWY2 283 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 SYT10Q6XYQ8 523 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 BTLAQ7Z6A9 289 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 P3H2Q8IVL5 708 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 SLC44A2Q8IWA5 706 aaPredicted RBP11.81□□□□□ -0.52
TPM1-220ENST00000559556 UBQLNLQ8IYU4 475 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 FAM9CQ8IZT9 166 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 MEIOBQ8N635 442 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 OR2M3Q8NG83 312 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 OR4N2Q8NGD1 307 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 C16orf78Q8WTQ4 265 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 MTBPQ96DY7 904 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 PGM2Q96G03 612 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 FAM111AQ96PZ2 611 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 TMEM237Q96Q45 408 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 MED18Q9BUE0 208 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 TSPYL1Q9H0U9 437 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 DSN1Q9H410 356 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 RNF122Q9H9V4 155 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 KLHL28Q9NXS3 571 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 ELOVL5Q9NYP7 299 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 SENP1Q9P0U3 644 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 ZNF175Q9Y473 711 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 ARFGEF3Q5TH69 2177 aa11.81□□□□□ -0.52
TPM1-220ENST00000559556 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.8□□□□□ -0.525e-6■■■□□ 16.3
TPM1-220ENST00000559556 MALRD1Q5VYJ5 2156 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 A0A087WV62 115 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 LINC01387J3KSC0 135 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 EMC8O43402 210 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 SCO2O43819 266 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 COQ9O75208 318 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 ULK1O75385 1050 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 TNFRSF21O75509 655 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 SUPT7LO94864 414 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 SLITRK5O94991 958 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 LY6G6DO95868 133 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 CGAP01215 116 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 CD8BP10966 210 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 FPR1P21462 350 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 LOXP28300 417 aaPredicted RBP11.8□□□□□ -0.52
TPM1-220ENST00000559556 HMOX2P30519 316 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 MPIP34949 423 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 GSTM5P46439 218 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 HTR6P50406 440 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 EEFSECP57772 596 aaKnown RBP11.8□□□□□ -0.52
TPM1-220ENST00000559556 OCRLQ01968 901 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 CKAP4Q07065 602 aaKnown RBP11.8□□□□□ -0.52
TPM1-220ENST00000559556 ZNF155Q12901 538 aaPredicted RBP11.8□□□□□ -0.52
TPM1-220ENST00000559556 FGFBP1Q14512 234 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 UNC50Q53HI1 259 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 RAET1LQ5VY80 246 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 C20orf204Q6ZNR8 217 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 GPRIN3Q6ZVF9 776 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 CHMP1BQ7LBR1 199 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 CIARTQ8N365 385 aaPredicted RBP11.8□□□□□ -0.52
TPM1-220ENST00000559556 FIG4Q92562 907 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 CAVIN3Q969G5 261 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 PIK3IP1Q96FE7 263 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 APIPQ96GX9 242 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 ZNF845Q96IR2 970 aaPredicted RBP11.8□□□□□ -0.52
TPM1-220ENST00000559556 CCL19Q99731 98 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 OPN3Q9H1Y3 402 aaPredicted RBP11.8□□□□□ -0.52
TPM1-220ENST00000559556 SIRT5Q9NXA8 310 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 NFU1Q9UMS0 254 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 OR10H1Q9Y4A9 318 aa11.8□□□□□ -0.52
TPM1-220ENST00000559556 OR2M5A3KFT3 312 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 MYO1GB0I1T2 1018 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 POC1B-GALNT4F8VUJ3 575 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 H0YC42 278 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 H7C1Q1 480 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 PSMG1O95456 288 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 SNRPAP09012 282 aaKnown RBP11.79□□□□□ -0.52
TPM1-220ENST00000559556 POU2F1P14859 743 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 HK1P19367 917 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 TAC1P20366 129 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 SUCLG1P53597 346 aaKnown RBP11.79□□□□□ -0.52
TPM1-220ENST00000559556 TPD52P55327 224 aaPredicted RBP11.79□□□□□ -0.52
TPM1-220ENST00000559556 SIRPAP78324 504 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms