RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 MID2Q9UJV3 735 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 MRTO4Q9UKD2 239 aaKnown RBP12.85□□□□□ -0.35
SNX6-210ENST00000557341 ABCG2Q9UNQ0 655 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 C19orf53Q9UNZ5 99 aaPredicted RBP12.85□□□□□ -0.35
SNX6-210ENST00000557341 SMIM23A6NLE4 172 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 UPK1AO00322 258 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 PLOD2O00469 737 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 COPEO14579 308 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 GOSR1O95249 250 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 PSMG1O95456 288 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 IFI6P09912 130 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 EPXP11678 715 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 CPA3P15088 417 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 TCEA1P23193 301 aaKnown RBP12.84□□□□□ -0.35
SNX6-210ENST00000557341 PRPH2P23942 346 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 CRHR1P34998 444 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 STARP49675 285 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 CLDN18P56856 261 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 FOXF2Q12947 444 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 GAB1Q13480 694 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 DAZAP2Q15038 168 aaPredicted RBP12.84□□□□□ -0.35
SNX6-210ENST00000557341 DECR1Q16698 335 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 PRSS53Q2L4Q9 553 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 LIPMQ5VYY2 423 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 CDC20BQ86Y33 519 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 GCNT2Q8N0V5 402 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 OR2L13Q8N349 312 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 EPS8L3Q8TE67 593 aaKnown RBP12.84□□□□□ -0.35
SNX6-210ENST00000557341 AMDHD1Q96NU7 426 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 G6PC3Q9BUM1 346 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 RBM24Q9BX46 236 aaKnown RBP12.84□□□□□ -0.35
SNX6-210ENST00000557341 CXXC4Q9H2H0 198 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 GLIPR2Q9H4G4 154 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 TNFRSF12AQ9NP84 129 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 SDHAF3Q9NRP4 125 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 CCM2LQ9NUG4 571 aaPredicted RBP12.84□□□□□ -0.35
SNX6-210ENST00000557341 OXSMQ9NWU1 459 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 RPH3AQ9Y2J0 694 aaPredicted RBP12.84□□□□□ -0.35
SNX6-210ENST00000557341 VPS13CQ709C8 3753 aa12.84□□□□□ -0.35
SNX6-210ENST00000557341 ZFHX3Q15911 3703 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 C17orf51A8MQB3 221 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 B4DXG7 233 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 RGS14O43566 566 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 HCRTR2O43614 444 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 NEFHP12036 1026 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 DNASE1P24855 282 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 PSMD4P55036 377 aaKnown RBP12.83□□□□□ -0.36
SNX6-210ENST00000557341 EEF1A1P68104 462 aaKnown RBP12.83□□□□□ -0.36
SNX6-210ENST00000557341 STX5Q13190 355 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 BCL2A1Q16548 175 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 EEF1A1P5Q5VTE0 462 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 RAET1LQ5VY80 246 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 CLEC6AQ6EIG7 209 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 PLXDC2Q6UX71 529 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 PAMR1Q6UXH9 720 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 CHMP1BQ7LBR1 199 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 P4HA3Q7Z4N8 544 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 LUZP2Q86TE4 346 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 FADS6Q8N9I5 356 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 LRRN4CLQ8ND94 238 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 CHDHQ8NE62 594 aaPredicted RBP12.83□□□□□ -0.36
SNX6-210ENST00000557341 INTS12Q96CB8 462 aaKnown RBP12.83□□□□□ -0.36
SNX6-210ENST00000557341 ELP4Q96EB1 424 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 LMF2Q9BU23 707 aaKnown RBP12.83□□□□□ -0.36
SNX6-210ENST00000557341 PIGMQ9H3S5 423 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 LIME1Q9H400 295 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 FAM120CQ9NX05 1096 aaKnown RBP12.83□□□□□ -0.36
SNX6-210ENST00000557341 GALNT8Q9NY28 637 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 PLEKHA6Q9Y2H5 1048 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 CCL27Q9Y4X3 112 aa12.83□□□□□ -0.36
SNX6-210ENST00000557341 TTC36A6NLP5 189 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 NPIPB8E9PQR5 432 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 SLC28A1O00337 649 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 PDPK1O15530 556 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 FADS1O60427 444 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 ZIC3O60481 467 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 SEC22BO75396 215 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 IL33O95760 270 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 PEPDP12955 493 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 KRT4P19013 534 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 GPC1P35052 558 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 RFX3P48380 749 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 CLK3P49761 638 aaKnown RBP12.82□□□□□ -0.36
SNX6-210ENST00000557341 DIO3P55073 304 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 B3GALT5-AS1P59052 145 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 HSPB3Q12988 150 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 KIAA0040Q15053 153 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 UBQLNLQ8IYU4 475 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 C4orf33Q8N1A6 199 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 OR2M3Q8NG83 312 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 ZFP28Q8NHY6 868 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 LINC01560Q8TB33 94 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 TRIM44Q96DX7 344 aaPredicted RBP12.82□□□□□ -0.36
SNX6-210ENST00000557341 ZNF764Q96H86 408 aaPredicted RBP12.82□□□□□ -0.36
SNX6-210ENST00000557341 EGLN2Q96KS0 407 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 CCT7Q99832 543 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 YIPF4Q9BSR8 244 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 TRMOQ9BU70 441 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 C12orf65Q9H3J6 166 aaKnown RBP12.82□□□□□ -0.36
SNX6-210ENST00000557341 DSN1Q9H410 356 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms