RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 IL1RL2Q9HB29 575 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 ZFP64Q9NPA5 681 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 TCF7L2Q9NQB0 619 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 ZIM2Q9NZV7 527 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 SEC14L3Q9UDX4 400 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 CBLCQ9ULV8 474 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 HRH3Q9Y5N1 445 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.84□□□□□ -0.99
SRP54-210ENST00000556380 ZNF407Q9C0G0 2248 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 NINQ8N4C6 2090 aa8.84□□□□□ -0.99
SRP54-210ENST00000556380 CENPEQ02224 2701 aa8.83□□□□□ -1
SRP54-210ENST00000556380 EML6Q6ZMW3 1958 aa8.83□□□□□ -1
SRP54-210ENST00000556380 C9JVG2 144 aa8.83□□□□□ -1
SRP54-210ENST00000556380 NPIPA5E9PKD4 350 aa8.83□□□□□ -1
SRP54-210ENST00000556380 HS6ST1O60243 411 aa8.83□□□□□ -1
SRP54-210ENST00000556380 FADS1O60427 444 aa8.83□□□□□ -1
SRP54-210ENST00000556380 ICOSLGO75144 302 aa8.83□□□□□ -1
SRP54-210ENST00000556380 REM1O75628 298 aa8.83□□□□□ -1
SRP54-210ENST00000556380 SLC22A3O75751 556 aa8.83□□□□□ -1
SRP54-210ENST00000556380 SNX4O95219 450 aa8.83□□□□□ -1
SRP54-210ENST00000556380 HMGN2P05204 90 aaKnown RBP8.83□□□□□ -1
SRP54-210ENST00000556380 PGRP06401 933 aa8.83□□□□□ -1
SRP54-210ENST00000556380 RFPL3SP0C7P2 107 aa8.83□□□□□ -1
SRP54-210ENST00000556380 ZNF24P17028 368 aa8.83□□□□□ -1
SRP54-210ENST00000556380 S100A3P33764 101 aa8.83□□□□□ -1
SRP54-210ENST00000556380 GAS1P54826 345 aa8.83□□□□□ -1
SRP54-210ENST00000556380 KCNK10P57789 538 aa8.83□□□□□ -1
SRP54-210ENST00000556380 PRR5P85299 388 aa8.83□□□□□ -1
SRP54-210ENST00000556380 GUCY1A3Q02108 690 aa8.83□□□□□ -1
SRP54-210ENST00000556380 SNTA1Q13424 505 aa8.83□□□□□ -1
SRP54-210ENST00000556380 EFR3AQ14156 821 aa8.83□□□□□ -1
SRP54-210ENST00000556380 DUSP5Q16690 384 aa8.83□□□□□ -1
SRP54-210ENST00000556380 HSP90B2PQ58FF3 399 aa8.83□□□□□ -1
SRP54-210ENST00000556380 TBCELQ5QJ74 424 aa8.83□□□□□ -1
SRP54-210ENST00000556380 PRAMEF20Q5VT98 475 aa8.83□□□□□ -1
SRP54-210ENST00000556380 GFRALQ6UXV0 394 aa8.83□□□□□ -1
SRP54-210ENST00000556380 GK5Q6ZS86 529 aa8.83□□□□□ -1
SRP54-210ENST00000556380 ACAD11Q709F0 780 aa8.83□□□□□ -1
SRP54-210ENST00000556380 ANKRD46Q86W74 232 aa8.83□□□□□ -1
SRP54-210ENST00000556380 FUNDC1Q8IVP5 155 aa8.83□□□□□ -1
SRP54-210ENST00000556380 ARFGAP2Q8N6H7 521 aa8.83□□□□□ -1
SRP54-210ENST00000556380 OR56A1Q8NGH5 318 aa8.83□□□□□ -1
SRP54-210ENST00000556380 RFWD2Q8NHY2 731 aa8.83□□□□□ -1
SRP54-210ENST00000556380 PIK3R3Q92569 461 aa8.83□□□□□ -1
SRP54-210ENST00000556380 MOAP1Q96BY2 351 aa8.83□□□□□ -1
SRP54-210ENST00000556380 RILPQ96NA2 401 aa8.83□□□□□ -1
SRP54-210ENST00000556380 MS4A4EQ96PG1 132 aa8.83□□□□□ -1
SRP54-210ENST00000556380 TSPAN10Q9H1Z9 355 aaPredicted RBP8.83□□□□□ -1
SRP54-210ENST00000556380 SERHL2Q9H4I8 314 aa8.83□□□□□ -1
SRP54-210ENST00000556380 NEUROD4Q9HD90 331 aa8.83□□□□□ -1
SRP54-210ENST00000556380 SERHLQ9NQF3 203 aa8.83□□□□□ -1
SRP54-210ENST00000556380 ZCCHC3Q9NUD5 404 aaKnown RBP8.83□□□□□ -1
SRP54-210ENST00000556380 FAM120CQ9NX05 1096 aaKnown RBP8.83□□□□□ -1
SRP54-210ENST00000556380 GIN1Q9NXP7 522 aa8.83□□□□□ -1
SRP54-210ENST00000556380 BTNL2Q9UIR0 455 aa8.83□□□□□ -1
SRP54-210ENST00000556380 NPIPA1Q9UND3 350 aa8.83□□□□□ -1
SRP54-210ENST00000556380 ZNF835Q9Y2P0 537 aa8.83□□□□□ -1
SRP54-210ENST00000556380 SNX8Q9Y5X2 465 aa8.83□□□□□ -1
SRP54-210ENST00000556380 DNAJC13O75165 2243 aa8.82□□□□□ -1
SRP54-210ENST00000556380 A0A1B0GVC2 190 aa8.82□□□□□ -1
SRP54-210ENST00000556380 B4DXG7 233 aa8.82□□□□□ -1
SRP54-210ENST00000556380 POLR3GO15318 223 aaPredicted RBP8.82□□□□□ -1
SRP54-210ENST00000556380 UNC5CO95185 931 aa8.82□□□□□ -1
SRP54-210ENST00000556380 IGHG3P01860 377 aa8.82□□□□□ -1
SRP54-210ENST00000556380 C1QCP02747 245 aa8.82□□□□□ -1
SRP54-210ENST00000556380 STSP08842 583 aa8.82□□□□□ -1
SRP54-210ENST00000556380 CELA3AP09093 270 aa8.82□□□□□ -1
SRP54-210ENST00000556380 CYP4B1P13584 511 aa8.82□□□□□ -1
SRP54-210ENST00000556380 CD1EP15812 388 aa8.82□□□□□ -1
SRP54-210ENST00000556380 MDH1P40925 334 aaKnown RBP8.82□□□□□ -1
SRP54-210ENST00000556380 RPP38P78345 283 aaKnown RBP8.82□□□□□ -1
SRP54-210ENST00000556380 MRPS22P82650 360 aaKnown RBP8.82□□□□□ -1
SRP54-210ENST00000556380 LASP1Q14847 261 aaKnown RBP8.82□□□□□ -1
SRP54-210ENST00000556380 VPS26BQ4G0F5 336 aa8.82□□□□□ -1
SRP54-210ENST00000556380 TIGD3Q6B0B8 471 aa8.82□□□□□ -1
SRP54-210ENST00000556380 CGB2Q6NT52 195 aa8.82□□□□□ -1
SRP54-210ENST00000556380 SLC30A6Q6NXT4 461 aa8.82□□□□□ -1
SRP54-210ENST00000556380 CDC73Q6P1J9 531 aa8.82□□□□□ -1
SRP54-210ENST00000556380 PAOXQ6QHF9 649 aa8.82□□□□□ -1
SRP54-210ENST00000556380 Q6ZPB1 254 aaPredicted RBP8.82□□□□□ -1
SRP54-210ENST00000556380 C6orf120Q7Z4R8 191 aa8.82□□□□□ -1
SRP54-210ENST00000556380 ZAR1Q86SH2 424 aa8.82□□□□□ -1
SRP54-210ENST00000556380 SLC22A16Q86VW1 577 aa8.82□□□□□ -1
SRP54-210ENST00000556380 CLEC4FQ8N1N0 589 aa8.82□□□□□ -1
SRP54-210ENST00000556380 MIER2Q8N344 545 aa8.82□□□□□ -1
SRP54-210ENST00000556380 WDSUB1Q8N9V3 476 aa8.82□□□□□ -1
SRP54-210ENST00000556380 VPS37AQ8NEZ2 397 aa8.82□□□□□ -1
SRP54-210ENST00000556380 OR9I1Q8NGQ6 314 aa8.82□□□□□ -1
SRP54-210ENST00000556380 GPR151Q8TDV0 419 aa8.82□□□□□ -1
SRP54-210ENST00000556380 SLC9A6Q92581 669 aa8.82□□□□□ -1
SRP54-210ENST00000556380 EFHD2Q96C19 240 aaPredicted RBP8.82□□□□□ -1
SRP54-210ENST00000556380 THOC1Q96FV9 657 aaKnown RBP8.82□□□□□ -1
SRP54-210ENST00000556380 TMEM41AQ96HV5 264 aa8.82□□□□□ -1
SRP54-210ENST00000556380 ZNF317Q96PQ6 595 aaPredicted RBP8.82□□□□□ -1
SRP54-210ENST00000556380 STACQ99469 402 aa8.82□□□□□ -1
SRP54-210ENST00000556380 YIPF4Q9BSR8 244 aa8.82□□□□□ -1
SRP54-210ENST00000556380 INPP5KQ9BT40 448 aa8.82□□□□□ -1
SRP54-210ENST00000556380 DOHHQ9BU89 302 aa8.82□□□□□ -1
SRP54-210ENST00000556380 ACTRT3Q9BYD9 372 aa8.82□□□□□ -1
SRP54-210ENST00000556380 RTN4RQ9BZR6 473 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms