RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 Q6ZPB1 254 aaPredicted RBP8.87□□□□□ -0.99
ACTN1-215ENST00000555616 RTL4Q6ZR62 310 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 MAMDC2Q7Z304 686 aaPredicted RBP8.87□□□□□ -0.99
ACTN1-215ENST00000555616 SZRD1Q7Z422 152 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 FJX1Q86VR8 437 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 SULF2Q8IWU5 870 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 CHERPQ8IWX8 916 aaKnown RBP8.87□□□□□ -0.99
ACTN1-215ENST00000555616 GHDCQ8N2G8 530 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 VWA5B2Q8N398 1253 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 OR56A1Q8NGH5 318 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 C16orf52Q8NHV5 167 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 MAGED4Q96JG8 741 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 SGCZQ96LD1 299 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 ANKRD27Q96NW4 1050 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 GPATCH1Q9BRR8 931 aaKnown RBP8.87□□□□□ -0.99
ACTN1-215ENST00000555616 SLC39A3Q9BRY0 314 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 SLC35A5Q9BS91 424 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 THUMPD3Q9BV44 507 aaKnown RBP8.87□□□□□ -0.99
ACTN1-215ENST00000555616 CNPPD1Q9BV87 410 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 WWTR1Q9GZV5 400 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 MMADHCQ9H3L0 296 aaPredicted RBP8.87□□□□□ -0.99
ACTN1-215ENST00000555616 CXorf36Q9H7Y0 433 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 NANOGQ9H9S0 305 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 LIN28AQ9H9Z2 209 aaKnown RBP8.87□□□□□ -0.99
ACTN1-215ENST00000555616 CXorf21Q9HAI6 301 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 TPT1P8Q9HAU6 139 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 DEPPQ9NTK1 212 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 ZCCHC3Q9NUD5 404 aaKnown RBP8.87□□□□□ -0.99
ACTN1-215ENST00000555616 DDX18Q9NVP1 670 aaKnown RBP8.87□□□□□ -0.99
ACTN1-215ENST00000555616 ADA2Q9NZK5 511 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 VAPAQ9P0L0 249 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 SLAMF8Q9P0V8 285 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 NPIPA1Q9UND3 350 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 ERVK-11Q9UQG0 969 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 ERVK-19Q9WJR5 959 aa8.87□□□□□ -0.99
ACTN1-215ENST00000555616 ICE1Q9Y2F5 2266 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 A0A087WV62 115 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 TRGV8A0A0C4DH27 118 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 A0A0G2JMM0 328 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 A0A1W2PPB8 328 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 A0A1W2PRS3 328 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 KIR3DP1A8MWS1 328 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 CLIC1O00299 241 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 TFECO14948 347 aaPredicted RBP8.86□□□□□ -0.99
ACTN1-215ENST00000555616 ASNA1O43681 348 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 PLOD3O60568 738 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 ZG16O60844 167 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 DNAJA2O60884 412 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 COQ9O75208 318 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 BCAS2O75934 225 aaPredicted RBP8.86□□□□□ -0.99
ACTN1-215ENST00000555616 HOXB9P17482 250 aaPredicted RBP8.86□□□□□ -0.99
ACTN1-215ENST00000555616 SLC6A2P23975 617 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 PGM1P36871 562 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 MC3RP41968 323 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 MAGEA8P43361 318 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 GPR85P60893 370 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 KCNJ2P63252 427 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 TXNL4AP83876 142 aaKnown RBP8.86□□□□□ -0.99
ACTN1-215ENST00000555616 DUSP2Q05923 314 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 FUT7Q11130 342 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 MAP4K2Q12851 820 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 GAB1Q13480 694 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 TP53BP2Q13625 1128 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 ZNF267Q14586 743 aaPredicted RBP8.86□□□□□ -0.99
ACTN1-215ENST00000555616 LTB4RQ15722 352 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 PRICKLE4Q2TBC4 344 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 ZNF791Q3KP31 576 aaPredicted RBP8.86□□□□□ -0.99
ACTN1-215ENST00000555616 GTDC1Q4AE62 458 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 RUNDC3AQ59EK9 446 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 ZNF628Q5EBL2 1059 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 PIGGQ5H8A4 983 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 LYPD8Q6UX82 237 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 IL20RBQ6UXL0 311 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 RNF111Q6ZNA4 994 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 SLC29A4Q7RTT9 530 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 LURAP1LQ8IV03 231 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 MSRB3Q8IXL7 192 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 DND1Q8IYX4 353 aaKnown RBP8.86□□□□□ -0.99
ACTN1-215ENST00000555616 SLC15A4Q8N697 577 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 ZNF441Q8N8Z8 693 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 ADCY4Q8NFM4 1077 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 OR2M7Q8NG81 312 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 OR5AK3PQ8NH89 298 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 SLC22A8Q8TCC7 542 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 ZFP90Q8TF47 636 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 KAT2AQ92830 837 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 SPACA9Q96E40 222 aaPredicted RBP8.86□□□□□ -0.99
ACTN1-215ENST00000555616 ELP4Q96EB1 424 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 NEURL3Q96EH8 262 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 AURKBQ96GD4 344 aaPredicted RBP8.86□□□□□ -0.99
ACTN1-215ENST00000555616 ECSITQ9BQ95 431 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 CPPED1Q9BRF8 314 aaPredicted RBP8.86□□□□□ -0.99
ACTN1-215ENST00000555616 SH2D2AQ9NP31 389 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 PLSCR2Q9NRY7 297 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 SLC6A13Q9NSD5 602 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 SIRT3Q9NTG7 399 aaPredicted RBP8.86□□□□□ -0.99
ACTN1-215ENST00000555616 SLC25A37Q9NYZ2 338 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 MAT2BQ9NZL9 334 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 GMEB1Q9Y692 573 aa8.86□□□□□ -0.99
ACTN1-215ENST00000555616 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms