RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 RFESDQ8TAC1 157 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 ZNF671Q8TAW3 534 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 CRYGNQ8WXF5 182 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 UPRTQ96BW1 309 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 NTNG2Q96CW9 530 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 TRIM44Q96DX7 344 aaPredicted RBP4.28□□□□□ -1.72
VRK1-205ENST00000555402 RBM4BQ9BQ04 359 aaKnown RBP4.28□□□□□ -1.72
VRK1-205ENST00000555402 RAI14Q9P0K7 980 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 MLXQ9UH92 298 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 B9D1Q9UPM9 204 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 RNF24Q9Y225 148 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 RNF115Q9Y4L5 304 aa4.28□□□□□ -1.72
VRK1-205ENST00000555402 GRIN2DO15399 1336 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 A8MUI8 341 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 H0YCG3 227 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 GMFGO60234 142 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 IGFBP1P08833 259 aaPredicted RBP4.27□□□□□ -1.73
VRK1-205ENST00000555402 ANXA3P12429 323 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 PRG2P13727 222 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 HNRNPA2B1P22626 353 aaKnown RBP4.27□□□□□ -1.73
VRK1-205ENST00000555402 HTR2AP28223 471 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 HMGCLP35914 325 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 POU3F4P49335 361 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 METAP1P53582 386 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 ZNF33BQ06732 778 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 SNTB2Q13425 540 aaKnown RBP4.27□□□□□ -1.73
VRK1-205ENST00000555402 ZIC1Q15915 447 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 SLC36A3Q495N2 470 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 NADK2Q4G0N4 442 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 MS4A13Q5J8X5 152 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 LCE3EQ5T5B0 92 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 ERICH1Q86X53 443 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 IPMKQ8NFU5 416 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 RASL10AQ92737 203 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 ADIPOR1Q96A54 375 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 DHTKD1Q96HY7 919 aaPredicted RBP4.27□□□□□ -1.73
VRK1-205ENST00000555402 AKR1E2Q96JD6 320 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 C4orf36Q96KX1 117 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 TTC25Q96NG3 672 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 TESK2Q96S53 571 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 SOSTQ9BQB4 213 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 RPP25Q9BUL9 199 aaKnown RBP4.27□□□□□ -1.73
VRK1-205ENST00000555402 DHX33Q9H6R0 707 aaKnown RBP4.27□□□□□ -1.73
VRK1-205ENST00000555402 RBM28Q9NW13 759 aaKnown RBP4.27□□□□□ -1.73
VRK1-205ENST00000555402 EXOSC1Q9Y3B2 195 aaKnown RBP4.27□□□□□ -1.73
VRK1-205ENST00000555402 CARMIL1Q5VZK9 1371 aa4.27□□□□□ -1.73
VRK1-205ENST00000555402 SF3B1O75533 1304 aaKnown RBP eCLIP4.26□□□□□ -1.73
VRK1-205ENST00000555402 TRBV7-9A0A0J9YWB2 115 aa4.26□□□□□ -1.73
VRK1-205ENST00000555402 TRIM49BA6NDI0 452 aa4.26□□□□□ -1.73
VRK1-205ENST00000555402 ZSCAN5CA6NGD5 496 aaPredicted RBP4.26□□□□□ -1.73
VRK1-205ENST00000555402 ZNF487B1APH4 448 aa4.26□□□□□ -1.73
VRK1-205ENST00000555402 PPIHO43447 177 aaKnown RBP4.26□□□□□ -1.73
VRK1-205ENST00000555402 GALR3O60755 368 aaPredicted RBP4.26□□□□□ -1.73
VRK1-205ENST00000555402 IGHV3-13P01766 116 aa4.26□□□□□ -1.73
VRK1-205ENST00000555402 KRT8P05787 483 aa4.26□□□□□ -1.73
VRK1-205ENST00000555402 WNT2P09544 360 aa4.26□□□□□ -1.73
VRK1-205ENST00000555402 PVRP15151 417 aa4.26□□□□□ -1.73
VRK1-205ENST00000555402 EMDP50402 254 aa4.26□□□□□ -1.73
VRK1-205ENST00000555402 KRTAP10-8P60410 259 aa4.26□□□□□ -1.73
VRK1-205ENST00000555402 MAPK6Q16659 721 aa4.26□□□□□ -1.73
VRK1-205ENST00000555402 CYBRD1Q53TN4 286 aa4.26□□□□□ -1.73
VRK1-205ENST00000555402 NHLRC3Q5JS37 347 aa4.26□□□□□ -1.73
VRK1-205ENST00000555402 LRRC70Q7Z2Q7 622 aa4.26□□□□□ -1.73
VRK1-205ENST00000555402 CEACAM19Q7Z692 300 aa4.26□□□□□ -1.73
VRK1-205ENST00000555402 SLC22A18ASQ8N1D0 253 aa4.26□□□□□ -1.73
VRK1-205ENST00000555402 OR5AU1Q8NGC0 362 aa4.26□□□□□ -1.73
VRK1-205ENST00000555402 FLVCR1-AS1Q8TAF5 88 aa4.26□□□□□ -1.73
VRK1-205ENST00000555402 TBCKQ8TEA7 893 aa4.26□□□□□ -1.73
VRK1-205ENST00000555402 MYCBPQ99417 103 aaPredicted RBP4.26□□□□□ -1.73
VRK1-205ENST00000555402 ERP44Q9BS26 406 aa4.26□□□□□ -1.73
VRK1-205ENST00000555402 TMEM117Q9H0C3 514 aa4.26□□□□□ -1.73
VRK1-205ENST00000555402 GPN2Q9H9Y4 310 aaPredicted RBP4.26□□□□□ -1.73
VRK1-205ENST00000555402 CALHM2Q9HA72 323 aa4.26□□□□□ -1.73
VRK1-205ENST00000555402 AMBNQ9NP70 447 aa4.26□□□□□ -1.73
VRK1-205ENST00000555402 RNF6Q9Y252 685 aa4.26□□□□□ -1.73
VRK1-205ENST00000555402 EIF3LQ9Y262 564 aaKnown RBP4.26□□□□□ -1.73
VRK1-205ENST00000555402 ACOD1A6NK06 481 aa4.25□□□□□ -1.73
VRK1-205ENST00000555402 FAM74A7A6NL05 159 aa4.25□□□□□ -1.73
VRK1-205ENST00000555402 SH3BGRLO75368 114 aa4.25□□□□□ -1.73
VRK1-205ENST00000555402 IGHG3P01860 377 aa4.25□□□□□ -1.73
VRK1-205ENST00000555402 CLUP10909 449 aa4.25□□□□□ -1.73
VRK1-205ENST00000555402 H2AFXP16104 143 aaPredicted RBP4.25□□□□□ -1.73
VRK1-205ENST00000555402 DRD5P21918 477 aa4.25□□□□□ -1.73
VRK1-205ENST00000555402 PSMA2P25787 234 aa4.25□□□□□ -1.73
VRK1-205ENST00000555402 PRELPP51888 382 aa4.25□□□□□ -1.73
VRK1-205ENST00000555402 PDK4Q16654 411 aa4.25□□□□□ -1.73
VRK1-205ENST00000555402 C17orf58Q2M2W7 97 aa4.25□□□□□ -1.73
VRK1-205ENST00000555402 SNAI3Q3KNW1 292 aa4.25□□□□□ -1.73
VRK1-205ENST00000555402 FAM74A3Q4VXF1 159 aa4.25□□□□□ -1.73
VRK1-205ENST00000555402 SLC47A2Q86VL8 602 aa4.25□□□□□ -1.73
VRK1-205ENST00000555402 ZDHHC21Q8IVQ6 265 aa4.25□□□□□ -1.73
VRK1-205ENST00000555402 CSNK1G2-AS1Q8NCQ2 148 aa4.25□□□□□ -1.73
VRK1-205ENST00000555402 OR2T34Q8NGX1 318 aa4.25□□□□□ -1.73
VRK1-205ENST00000555402 PNPT1Q8TCS8 783 aaKnown RBP4.25□□□□□ -1.73
VRK1-205ENST00000555402 ITLN1Q8WWA0 313 aa4.25□□□□□ -1.73
VRK1-205ENST00000555402 C11orf24Q96F05 449 aaPredicted RBP4.25□□□□□ -1.73
VRK1-205ENST00000555402 TEX13BQ9BXU2 312 aa4.25□□□□□ -1.73
VRK1-205ENST00000555402 RAB33BQ9H082 229 aa4.25□□□□□ -1.73
VRK1-205ENST00000555402 COMMD4Q9H0A8 199 aa4.25□□□□□ -1.73
VRK1-205ENST00000555402 GNB4Q9HAV0 340 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms