RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 SCP2D1Q9UJQ7 156 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 CLCA2Q9UQC9 943 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 YARS2Q9Y2Z4 477 aaKnown RBP10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 NPTNQ9Y639 398 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 MKI67P46013 3256 aaKnown RBP10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 FAM227AF5H4B4 570 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 KHNYNO15037 678 aaKnown RBP10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 SPINT1O43278 529 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 ITGA10O75578 1167 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 RPN2P04844 631 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 LIMS3P0CW19 117 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 LIMS4P0CW20 117 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 CD53P19397 219 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 SOX9P48436 509 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 TAS2R50P59544 299 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 CTAG1AP78358 180 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 TSTA3Q13630 321 aaPredicted RBP10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 ARHGAP19Q14CB8 494 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 HNRNPA1L2Q32P51 320 aaKnown RBP10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 CYP27C1Q4G0S4 372 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 OR2G6Q5TZ20 316 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 RTL4Q6ZR62 310 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 KLHL36Q8N4N3 616 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 GPR32P1Q8NGA4 272 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 WDR48Q8TAF3 677 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 SP7Q8TDD2 431 aaPredicted RBP10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 POF1BQ8WVV4 589 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 GATAD2BQ8WXI9 593 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 THAP7Q9BT49 309 aaPredicted RBP10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 GSX2Q9BZM3 304 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 RNF32Q9H0A6 362 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 ERVMER34-1Q9H9K5 563 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 PELI2Q9HAT8 420 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 ZNF224Q9NZL3 707 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 RABL2AQ9UBK7 228 aaPredicted RBP10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 ZNF222Q9UK12 451 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 RABL2BQ9UNT1 228 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 LIPT1Q9Y234 373 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 RWDD3Q9Y3V2 267 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 SESN1Q9Y6P5 492 aa10.05□□□□□ -0.8
MTHFD1-210ENST00000555252 HRO43593 1189 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 WDPCPO95876 746 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 FGBP02675 491 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 KLK1P06870 262 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 HOXD4P09016 255 aaPredicted RBP10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 SULT1A3P0DMM9 295 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 SULT1A4P0DMN0 295 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 C6P13671 934 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 ZNF250P15622 560 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 CEBPBP17676 345 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 ACSL1P33121 698 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 BTCP35070 178 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 CTNNB1P35222 781 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 SOAT1P35610 550 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 SLC1A3P43003 542 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 PITPNBP48739 271 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 NTHL1P78549 312 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 CSTF1Q05048 431 aaKnown RBP10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 MAP4K2Q12851 820 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 ELAVL3Q14576 367 aaKnown RBP10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 NTRK2Q16620 822 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 MPEG1Q2M385 716 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 FNDC3BQ53EP0 1204 aaKnown RBP10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 BCL2L15Q5TBC7 163 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 C16orf62Q7Z3J2 963 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 GRASPQ7Z6J2 395 aaPredicted RBP10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 OAFQ86UD1 273 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 UXS1Q8NBZ7 420 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 SPPL3Q8TCT6 385 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 SLC7A13Q8TCU3 470 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 ARRDC3Q96B67 414 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 ERMAPQ96PL5 475 aaPredicted RBP10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 ZDHHC5Q9C0B5 715 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 PITHD1Q9GZP4 211 aaPredicted RBP10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 PCBD2Q9H0N5 130 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 RHBGQ9H310 441 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 OR51B5Q9H339 312 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 OSGEPL1Q9H4B0 414 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 NEUROD4Q9HD90 331 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 MIEF1Q9NQG6 463 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 MED17Q9NVC6 651 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 UCKL1Q9NWZ5 548 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 MALT1Q9UDY8 824 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 ACSL6Q9UKU0 697 aa10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 EXOGQ9Y2C4 368 aaKnown RBP10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 MRPS23Q9Y3D9 190 aaKnown RBP10.04□□□□□ -0.8
MTHFD1-210ENST00000555252 IGHA1P01876 353 aa10.03□□□□□ -0.8
MTHFD1-210ENST00000555252 IGFBP1P08833 259 aaPredicted RBP10.03□□□□□ -0.8
MTHFD1-210ENST00000555252 ADRB3P13945 408 aa10.03□□□□□ -0.8
MTHFD1-210ENST00000555252 ATF4P18848 351 aaPredicted RBP10.03□□□□□ -0.8
MTHFD1-210ENST00000555252 ELK1P19419 428 aa10.03□□□□□ -0.8
MTHFD1-210ENST00000555252 NPR2P20594 1047 aa10.03□□□□□ -0.8
MTHFD1-210ENST00000555252 DNASE1P24855 282 aa10.03□□□□□ -0.8
MTHFD1-210ENST00000555252 IFNGR2P38484 337 aa10.03□□□□□ -0.8
MTHFD1-210ENST00000555252 CTBP2P56545 445 aa10.03□□□□□ -0.8
MTHFD1-210ENST00000555252 CNTN1Q12860 1018 aa10.03□□□□□ -0.8
MTHFD1-210ENST00000555252 CAMK2DQ13557 499 aa10.03□□□□□ -0.8
MTHFD1-210ENST00000555252 ZNF267Q14586 743 aaPredicted RBP10.03□□□□□ -0.8
MTHFD1-210ENST00000555252 TRAM1Q15629 374 aa10.03□□□□□ -0.8
MTHFD1-210ENST00000555252 C9orf64Q5T6V5 341 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms