RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 FAM90A27PA6NNH2 459 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 WDR1O75083 606 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 SNUPNO95149 360 aaKnown RBP9.73□□□□□ -0.85
SHMT2-213ENST00000554600 KCNH1O95259 989 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 HPNP05981 417 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 LAMP1P11279 417 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 G6PDP11413 515 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 AGAP20933 346 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 ENDOUP21128 410 aaKnown RBP9.73□□□□□ -0.85
SHMT2-213ENST00000554600 PTPN6P29350 595 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 SOAT1P35610 550 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 PTGDSP41222 190 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 PSMD4P55036 377 aaKnown RBP9.73□□□□□ -0.85
SHMT2-213ENST00000554600 PRR5P85299 388 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 EMX2Q04743 252 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 STX5Q13190 355 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 GAB1Q13480 694 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 CASP8Q14790 479 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 PGS1Q32NB8 556 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 TMEM81Q6P7N7 255 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 PLCZ1Q86YW0 608 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 CCDC71Q8IV32 467 aaPredicted RBP9.73□□□□□ -0.85
SHMT2-213ENST00000554600 KIRREL3Q8IZU9 778 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 MARVELD2Q8N4S9 558 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 FAM83FQ8NEG4 500 aaPredicted RBP9.73□□□□□ -0.85
SHMT2-213ENST00000554600 OR4K17Q8NGC6 315 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 OR14L1PQ8NHC6 308 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 NUDT8Q8WV74 236 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 ASB5Q8WWX0 329 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 PIK3R3Q92569 461 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 MARVELD3Q96A59 401 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 DTNBP1Q96EV8 351 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 RMND5BQ96G75 393 aaPredicted RBP9.73□□□□□ -0.85
SHMT2-213ENST00000554600 MS4A4EQ96PG1 132 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 SORT1Q99523 831 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 YIPF4Q9BSR8 244 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 LMF2Q9BU23 707 aaKnown RBP9.73□□□□□ -0.85
SHMT2-213ENST00000554600 NUF2Q9BZD4 464 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 RUBCNLQ9H714 662 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 AKTIPQ9H8T0 292 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 TMBIM4Q9HC24 238 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 CHST11Q9NPF2 352 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 ZCCHC3Q9NUD5 404 aaKnown RBP9.73□□□□□ -0.85
SHMT2-213ENST00000554600 PNPOQ9NVS9 261 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 NOP53Q9NZM5 478 aaKnown RBP9.73□□□□□ -0.85
SHMT2-213ENST00000554600 PPP4R1LQ9P1A2 415 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 ATP6V1HQ9UI12 483 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 DKKL1Q9UK85 242 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 RNF6Q9Y252 685 aa9.73□□□□□ -0.85
SHMT2-213ENST00000554600 GXYLT2A0PJZ3 443 aa9.72□□□□□ -0.85
SHMT2-213ENST00000554600 HNRNPRO43390 633 aaKnown RBP9.72□□□□□ -0.85
SHMT2-213ENST00000554600 CBR3O75828 277 aa9.72□□□□□ -0.85
SHMT2-213ENST00000554600 PSMG1O95456 288 aa9.72□□□□□ -0.85
SHMT2-213ENST00000554600 C6orf47O95873 294 aa9.72□□□□□ -0.85
SHMT2-213ENST00000554600 COX6B1P14854 86 aa9.72□□□□□ -0.85
SHMT2-213ENST00000554600 GABRA1P14867 456 aa9.72□□□□□ -0.85
SHMT2-213ENST00000554600 PRPS1L1P21108 318 aa9.72□□□□□ -0.85
SHMT2-213ENST00000554600 EVI2BP34910 448 aa9.72□□□□□ -0.85
SHMT2-213ENST00000554600 CLK3P49761 638 aaKnown RBP9.72□□□□□ -0.85
SHMT2-213ENST00000554600 WDR4P57081 412 aaKnown RBP9.72□□□□□ -0.85
SHMT2-213ENST00000554600 TP53BP2Q13625 1128 aa9.72□□□□□ -0.85
SHMT2-213ENST00000554600 CDSNQ15517 529 aa9.72□□□□□ -0.85
SHMT2-213ENST00000554600 ZNF630Q2M218 657 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-213ENST00000554600 LSM12Q3MHD2 195 aaKnown RBP9.72□□□□□ -0.85
SHMT2-213ENST00000554600 ATG16L1Q676U5 607 aa9.72□□□□□ -0.85
SHMT2-213ENST00000554600 GALNT10Q86SR1 603 aa9.72□□□□□ -0.85
SHMT2-213ENST00000554600 COX18Q8N8Q8 333 aa9.72□□□□□ -0.85
SHMT2-213ENST00000554600 CDRT4Q8N9R6 151 aa9.72□□□□□ -0.85
SHMT2-213ENST00000554600 WDSUB1Q8N9V3 476 aa9.72□□□□□ -0.85
SHMT2-213ENST00000554600 ABTB1Q969K4 478 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-213ENST00000554600 OTUB1Q96FW1 271 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-213ENST00000554600 TTYH2Q9BSA4 534 aa9.72□□□□□ -0.85
SHMT2-213ENST00000554600 DUSP26Q9BV47 211 aa9.72□□□□□ -0.85
SHMT2-213ENST00000554600 UGT2B28Q9BY64 529 aa9.72□□□□□ -0.85
SHMT2-213ENST00000554600 TBL1XR1Q9BZK7 514 aa9.72□□□□□ -0.85
SHMT2-213ENST00000554600 C20orf27Q9GZN8 174 aa9.72□□□□□ -0.85
SHMT2-213ENST00000554600 UBQLN3Q9H347 655 aa9.72□□□□□ -0.85
SHMT2-213ENST00000554600 SDHAF3Q9NRP4 125 aa9.72□□□□□ -0.85
SHMT2-213ENST00000554600 MARCOQ9UEW3 520 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-213ENST00000554600 FAM215AQ9Y5M1 114 aa9.72□□□□□ -0.85
SHMT2-213ENST00000554600 FBN2P35556 2912 aa9.71□□□□□ -0.85
SHMT2-213ENST00000554600 C17orf51A8MQB3 221 aa9.71□□□□□ -0.86
SHMT2-213ENST00000554600 GMFGO60234 142 aa9.71□□□□□ -0.86
SHMT2-213ENST00000554600 UTS2O95399 124 aa9.71□□□□□ -0.86
SHMT2-213ENST00000554600 IL33O95760 270 aa9.71□□□□□ -0.86
SHMT2-213ENST00000554600 HOXD4P09016 255 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-213ENST00000554600 IFI6P09912 130 aa9.71□□□□□ -0.86
SHMT2-213ENST00000554600 ALOX5P09917 674 aa9.71□□□□□ -0.86
SHMT2-213ENST00000554600 GLI4P10075 376 aa9.71□□□□□ -0.86
SHMT2-213ENST00000554600 KITP10721 976 aa9.71□□□□□ -0.86
SHMT2-213ENST00000554600 ACP2P11117 423 aa9.71□□□□□ -0.86
SHMT2-213ENST00000554600 BMP7P18075 431 aa9.71□□□□□ -0.86
SHMT2-213ENST00000554600 LBPP18428 481 aa9.71□□□□□ -0.86
SHMT2-213ENST00000554600 DPP4P27487 766 aa9.71□□□□□ -0.86
SHMT2-213ENST00000554600 CHRNB4P30926 498 aa9.71□□□□□ -0.86
SHMT2-213ENST00000554600 FRKP42685 505 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-213ENST00000554600 CCT3P49368 545 aaKnown RBP9.71□□□□□ -0.86
SHMT2-213ENST00000554600 PRIM2P49643 509 aa9.71□□□□□ -0.86
SHMT2-213ENST00000554600 DIO3P55073 304 aa9.71□□□□□ -0.86
SHMT2-213ENST00000554600 SRYQ05066 204 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms