RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 XKP51811 444 aa12.88□□□□□ -0.35
SPTLC2-202ENST00000554365 IST1P53990 364 aa12.88□□□□□ -0.35
SPTLC2-202ENST00000554365 STX5Q13190 355 aa12.88□□□□□ -0.35
SPTLC2-202ENST00000554365 MLC1Q15049 377 aa12.88□□□□□ -0.35
SPTLC2-202ENST00000554365 GTDC1Q4AE62 458 aa12.88□□□□□ -0.35
SPTLC2-202ENST00000554365 LRIF1Q5T3J3 769 aa12.88□□□□□ -0.35
SPTLC2-202ENST00000554365 ANXA8L1Q5VT79 327 aa12.88□□□□□ -0.35
SPTLC2-202ENST00000554365 C8orf82Q6P1X6 216 aaPredicted RBP12.88□□□□□ -0.35
SPTLC2-202ENST00000554365 DGAT2L6Q6ZPD8 337 aa12.88□□□□□ -0.35
SPTLC2-202ENST00000554365 ZNF551Q7Z340 670 aaPredicted RBP12.88□□□□□ -0.35
SPTLC2-202ENST00000554365 MSRB3Q8IXL7 192 aa12.88□□□□□ -0.35
SPTLC2-202ENST00000554365 GPALPP1Q8IXQ4 340 aa12.88□□□□□ -0.35
SPTLC2-202ENST00000554365 NATD1Q8N6N6 113 aa12.88□□□□□ -0.35
SPTLC2-202ENST00000554365 GOT1L1Q8NHS2 421 aaPredicted RBP12.88□□□□□ -0.35
SPTLC2-202ENST00000554365 PSMA8Q8TAA3 256 aa12.88□□□□□ -0.35
SPTLC2-202ENST00000554365 OR5P2Q8WZ92 322 aa12.88□□□□□ -0.35
SPTLC2-202ENST00000554365 SLC7A6OSQ96CW6 309 aaPredicted RBP12.88□□□□□ -0.35
SPTLC2-202ENST00000554365 TTTY12Q9BZ98 90 aa12.88□□□□□ -0.35
SPTLC2-202ENST00000554365 SLC24A3Q9HC58 644 aa12.88□□□□□ -0.35
SPTLC2-202ENST00000554365 SIRT3Q9NTG7 399 aaPredicted RBP12.88□□□□□ -0.35
SPTLC2-202ENST00000554365 PSME2Q9UL46 239 aa12.88□□□□□ -0.35
SPTLC2-202ENST00000554365 LIPGQ9Y5X9 500 aa12.88□□□□□ -0.35
SPTLC2-202ENST00000554365 MTORP42345 2549 aa12.88□□□□□ -0.35
SPTLC2-202ENST00000554365 A0A096LPI6 279 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 A0A1W2PRB8 838 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 WWP2O00308 870 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 AIM2O14862 343 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 C1QCP02747 245 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 PORP16435 677 aaPredicted RBP12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 DDX5P17844 614 aaKnown RBP12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 CSNK2A2P19784 350 aaPredicted RBP12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 ACVR2AP27037 513 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 SOX3P41225 446 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 CDK9P50750 372 aaKnown RBP12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 GPR143P51810 404 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 HBA1P69905 142 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 PLIN5Q00G26 463 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 MGAT2Q10469 447 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 LTB4RQ15722 352 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 ZSCAN26Q16670 478 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 B3GNT6Q6ZMB0 384 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 RINLQ6ZS11 566 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 SLC22A16Q86VW1 577 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 CCDC116Q8IYX3 515 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 LRRC25Q8N386 305 aaPredicted RBP12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 ZBED6CLQ96FA7 236 aaPredicted RBP12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 ITCHQ96J02 903 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 BBS4Q96RK4 519 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 RASL10BQ96S79 203 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 TTYH2Q9BSA4 534 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 CXorf36Q9H7Y0 433 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 ZDHHC11Q9H8X9 412 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 ADAP2Q9NPF8 381 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 DNAJB12Q9NXW2 375 aaKnown RBP12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 SLC25A37Q9NYZ2 338 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 MYOTQ9UBF9 498 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 PPIEQ9UNP9 301 aaKnown RBP12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 CLCA3PQ9Y6N3 262 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 ZNF780BQ9Y6R6 833 aa12.87□□□□□ -0.35
SPTLC2-202ENST00000554365 TMEM200CA6NKL6 621 aa12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 FIGNL2A6NMB9 653 aa12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 BCKDKO14874 412 aa12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 CPSF4O95639 269 aaKnown RBP12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 ATP1B1P05026 303 aa12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 SLC35E2P0CK97 266 aa12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 NTSP30990 170 aa12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 MAGEA5P43359 124 aa12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 TRPC1P48995 793 aa12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 NCBP2P52298 156 aaKnown RBP eCLIP12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 GAB1Q13480 694 aa12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 ELAVL1Q15717 326 aaKnown RBP12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 TRMT5Q32P41 509 aaKnown RBP12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 MMEL1Q495T6 779 aa12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 ZNF628Q5EBL2 1059 aa12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 HACD2Q6Y1H2 254 aa12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 DNAJC14Q6Y2X3 702 aaPredicted RBP12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 HSDL2Q6YN16 418 aa12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 DHDDSQ86SQ9 333 aa12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 SAMD14Q8IZD0 417 aaPredicted RBP12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 RBM15BQ8NDT2 890 aaKnown RBP12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 OR4A15Q8NGL6 344 aa12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 OR9A2Q8NGT5 310 aa12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 FAM173AQ9BQD7 235 aa12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 GPATCH1Q9BRR8 931 aaKnown RBP12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 TMUB1Q9BVT8 246 aa12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 ALOXE3Q9BYJ1 711 aa12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 RMND5AQ9H871 391 aa12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 EFCAB1Q9HAE3 211 aa12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 CCM2LQ9NUG4 571 aaPredicted RBP12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 GIMAP4Q9NUV9 329 aa12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 VAPAQ9P0L0 249 aa12.86□□□□□ -0.35
SPTLC2-202ENST00000554365 OR14I1A6ND48 311 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 B2RBV5 119 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 RFXANKO14593 260 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 GSNP06396 782 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 CT62P0C5K7 136 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 ZCCHC18P0CG32 403 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 GLI4P10075 376 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 CNR1P21554 472 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 STT3AP46977 705 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms