RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 MSL3P1P0C860 447 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 HOXD12P35452 270 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 PROX2Q3B8N5 592 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 ZCCHC12Q6PEW1 402 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 CLIP3Q96DZ5 547 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 VSTM2LQ96N03 204 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 ARRDC1-AS1Q9H2J1 176 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 PNO1Q9NRX1 252 aaKnown RBP18.3■□□□□ 0.52
SSH1-209ENST00000551165 SLC22A11Q9NSA0 550 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 GMPPBQ9Y5P6 360 aa18.3■□□□□ 0.52
SSH1-209ENST00000551165 E9PQ18 207 aa18.29■□□□□ 0.52
SSH1-209ENST00000551165 DSCR3O14972 297 aa18.29■□□□□ 0.52
SSH1-209ENST00000551165 STX11O75558 287 aa18.29■□□□□ 0.52
SSH1-209ENST00000551165 KCNK2O95069 426 aa18.29■□□□□ 0.52
SSH1-209ENST00000551165 CER1O95813 267 aa18.29■□□□□ 0.52
SSH1-209ENST00000551165 TNNI3P19429 210 aa18.29■□□□□ 0.52
SSH1-209ENST00000551165 PRKAR1BP31321 381 aa18.29■□□□□ 0.52
SSH1-209ENST00000551165 CNR2P34972 360 aa18.29■□□□□ 0.52
SSH1-209ENST00000551165 DSG2Q14126 1118 aa18.29■□□□□ 0.52
SSH1-209ENST00000551165 NADK2Q4G0N4 442 aa18.29■□□□□ 0.52
SSH1-209ENST00000551165 SHISA6Q6ZSJ9 500 aa18.29■□□□□ 0.52
SSH1-209ENST00000551165 OR4D9Q8NGE8 314 aa18.29■□□□□ 0.52
SSH1-209ENST00000551165 C16orf52Q8NHV5 167 aa18.29■□□□□ 0.52
SSH1-209ENST00000551165 PTPMT1Q8WUK0 201 aaPredicted RBP18.29■□□□□ 0.52
SSH1-209ENST00000551165 MVB12AQ96EY5 273 aa18.29■□□□□ 0.52
SSH1-209ENST00000551165 BLACEA4D250 179 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 YKT6O15498 198 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 UGT2B11O75310 529 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 ANXA8P13928 327 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 FBLP22087 321 aaKnown RBP18.28■□□□□ 0.52
SSH1-209ENST00000551165 POU6F2P78424 691 aaPredicted RBP18.28■□□□□ 0.52
SSH1-209ENST00000551165 DAB2P98082 770 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 IL5RAQ01344 420 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 LIN52Q52LA3 116 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 PODNL1Q6PEZ8 512 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 MEX3DQ86XN8 651 aaKnown RBP18.28■□□□□ 0.52
SSH1-209ENST00000551165 GABARAPL3Q9BY60 117 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 ADNPQ9H2P0 1102 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 CTSFQ9UBX1 484 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 SATB2Q9UPW6 733 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 A0A1B0GX78 115 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 CPSF4LA6NMK7 179 aaKnown RBP18.28■□□□□ 0.52
SSH1-209ENST00000551165 C17orf105B2RV13 164 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 SYT5O00445 386 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 TOX3O15405 576 aaPredicted RBP18.28■□□□□ 0.52
SSH1-209ENST00000551165 COQ9O75208 318 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 UGT2B17O75795 530 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 IFI6P09912 130 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 CKMT1AP12532 417 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 AVPR2P30518 371 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 MAPK10P53779 464 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 EEF1A1P68104 462 aaKnown RBP18.28■□□□□ 0.52
SSH1-209ENST00000551165 PLAURQ03405 335 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 FUT7Q11130 342 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 C6orf141Q5SZD1 244 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 DCST1Q5T197 706 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 ARHGAP40Q5TG30 622 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 DHRS4L2Q6PKH6 230 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 PEX5LQ8IYB4 626 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 ZNF619Q8N2I2 560 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 ZNF615Q8N8J6 731 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 TMIGD2Q96BF3 282 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 LMF2Q9BU23 707 aaKnown RBP18.28■□□□□ 0.52
SSH1-209ENST00000551165 FNDC11Q9BVV2 318 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 SAP130Q9H0E3 1048 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 OR10A5Q9H207 317 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 APMAPQ9HDC9 416 aa18.28■□□□□ 0.52
SSH1-209ENST00000551165 IGFBP1P08833 259 aaPredicted RBP18.27■□□□□ 0.52
SSH1-209ENST00000551165 PRG2P13727 222 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 RPL5P46777 297 aaKnown RBP18.27■□□□□ 0.52
SSH1-209ENST00000551165 PIGFQ07326 219 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 CDK5R2Q13319 367 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 KLHL17Q6TDP4 642 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 NAT6Q93015 286 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 PHOX2BQ99453 314 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 MESP1Q9BRJ9 268 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 SEMA4GQ9NTN9 838 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 IGKV3D-11A0A0A0MRZ8 115 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 KIAA0513O60268 411 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 BRINP1O60477 761 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 THY1P04216 161 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 CT45A8P0DMV1 189 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 CT45A9P0DMV2 189 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 RHAGQ02094 409 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 KEAP1Q14145 624 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 CT45A2Q5DJT8 189 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 PWWP2BQ6NUJ5 590 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 COX15Q7KZN9 410 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 B3GNT8Q7Z7M8 397 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 SENP5Q96HI0 755 aaPredicted RBP18.27■□□□□ 0.52
SSH1-209ENST00000551165 PRRC1Q96M27 445 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 OR1F2PQ96R84 312 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 LMF1Q96S06 567 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 ITPAQ9BY32 194 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 RASSF1Q9NS23 344 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 SLC13A4Q9UKG4 626 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 TMCC3Q9ULS5 477 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 PCDHGA6Q9Y5G7 932 aa18.27■□□□□ 0.52
SSH1-209ENST00000551165 SH3PXD2BA1X283 911 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 OR10H3O60404 316 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms