RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 A6NL46 340 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 PRODHO43272 600 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 LALBAP00709 142 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 GKN3PP0CG01 181 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 CD8BP10966 210 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 ACP2P11117 423 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 CELP19835 753 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 GSTM3P21266 225 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 CPN2P22792 545 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 HOXD12P35452 270 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 IFNGR2P38484 337 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 SLC16A1P53985 500 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 FABP5Q01469 135 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 ST3GAL3Q11203 375 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 NDUFA9Q16795 377 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 PARM1Q6UWI2 310 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 OR4Q3Q8NH05 313 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 UFD1Q92890 307 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 DCLRE1CQ96SD1 692 aaKnown RBP8.61□□□□□ -1.03
UBE2N-205ENST00000550657 CCDC32Q9BV29 185 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 PITHD1Q9GZP4 211 aaPredicted RBP8.61□□□□□ -1.03
UBE2N-205ENST00000550657 TMEM74BQ9NUR3 256 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 SLC7A7Q9UM01 511 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 CHST2Q9Y4C5 530 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 DOCK9Q9BZ29 2069 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 C2orf92A0A1B0GVN3 265 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 SLC30A4O14863 429 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 ADH1BP00325 375 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 ACADMP11310 421 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 ACTR1BP42025 376 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 ACTR1AP61163 376 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 STXBP1P61764 594 aaKnown RBP8.61□□□□□ -1.03
UBE2N-205ENST00000550657 ZNF776Q68DI1 518 aaPredicted RBP8.61□□□□□ -1.03
UBE2N-205ENST00000550657 MRM1Q6IN84 353 aaKnown RBP8.61□□□□□ -1.03
UBE2N-205ENST00000550657 ZNF517Q6ZMY9 492 aaPredicted RBP8.61□□□□□ -1.03
UBE2N-205ENST00000550657 NRROSQ86YC3 692 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 ZNF614Q8N883 585 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 FGF14Q92915 247 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 SLC25A46Q96AG3 418 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 SLC41A3Q96GZ6 507 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 SAMD8Q96LT4 415 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 TIMM29Q9BSF4 260 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 RAB11FIP5Q9BXF6 653 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 SRMSQ9H3Y6 488 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 MED20Q9H944 212 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 CACYBPQ9HB71 228 aaKnown RBP8.61□□□□□ -1.03
UBE2N-205ENST00000550657 NEK6Q9HC98 313 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 POLMQ9NP87 494 aaPredicted RBP8.61□□□□□ -1.03
UBE2N-205ENST00000550657 CES1P1Q9UKY3 287 aa8.61□□□□□ -1.03
UBE2N-205ENST00000550657 LRRC72A6NJI9 287 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 SOCS6O14544 535 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 CASC3O15234 703 aaKnown RBP8.6□□□□□ -1.03
UBE2N-205ENST00000550657 HYAL3O43820 417 aaPredicted RBP8.6□□□□□ -1.03
UBE2N-205ENST00000550657 LDB3O75112 727 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 RASGRP1O95267 797 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 CPEP16870 476 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 POLR2CP19387 275 aaPredicted RBP8.6□□□□□ -1.03
UBE2N-205ENST00000550657 AHRP35869 848 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 RFX2P48378 723 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 TSPAN31Q12999 210 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 CCDC85BQ15834 202 aaPredicted RBP8.6□□□□□ -1.03
UBE2N-205ENST00000550657 AGAP6Q5VW22 663 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 FCRLBQ6BAA4 426 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 TMEM64Q6YI46 380 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 ABI3BPQ7Z7G0 1075 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 OR51G2Q8NGK0 314 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 UBASH3BQ8TF42 649 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 TMCO6Q96DC7 493 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 AGAP4Q96P64 663 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 SECISBP2Q96T21 854 aaKnown RBP8.6□□□□□ -1.03
UBE2N-205ENST00000550657 ACTRT3Q9BYD9 372 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 SRRQ9GZT4 340 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 HOXD1Q9GZZ0 328 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 MIXL1Q9H2W2 232 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 SFXN1Q9H9B4 322 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 H2AFY2Q9P0M6 372 aaPredicted RBP8.6□□□□□ -1.03
UBE2N-205ENST00000550657 PLEKHB1Q9UF11 243 aaPredicted RBP8.6□□□□□ -1.03
UBE2N-205ENST00000550657 RWDD3Q9Y3V2 267 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 WDR45Q9Y484 360 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 SNTNA6NMZ2 147 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 CDC42EP2O14613 210 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 THY1P04216 161 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 LIMS3P0CW19 117 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 LIMS4P0CW20 117 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 PRG2P13727 222 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 ETV6P41212 452 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 OMPP47874 163 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 RAB40BQ12829 278 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 AGERQ15109 404 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 FAM214AQ32MH5 1076 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 PUS10Q3MIT2 529 aaKnown RBP8.6□□□□□ -1.03
UBE2N-205ENST00000550657 KLHL12Q53G59 568 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 TRMT12Q53H54 448 aaKnown RBP8.6□□□□□ -1.03
UBE2N-205ENST00000550657 ZC3H14Q6PJT7 736 aaKnown RBP8.6□□□□□ -1.03
UBE2N-205ENST00000550657 GDPGP1Q6ZNW5 385 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 GDF7Q7Z4P5 450 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 VN1R4Q7Z5H5 301 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 RAB43Q86YS6 212 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 SCAIQ8N9R8 606 aa8.6□□□□□ -1.03
UBE2N-205ENST00000550657 MFSD9Q8NBP5 474 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms