RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 MBD3L3A6NE82 208 aaPredicted RBP6.08□□□□□ -1.44
SCAF11-211ENST00000547950 MBD3L5A6NJ08 208 aaPredicted RBP6.08□□□□□ -1.44
SCAF11-211ENST00000547950 CLCA1A8K7I4 914 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 C17orf51A8MQB3 221 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 MYO1GB0I1T2 1018 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 UPK1AO00322 258 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 SLC28A1O00337 649 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 PLOD2O00469 737 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 SCO2O43819 266 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 GMFGO60234 142 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 ZIC3O60481 467 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 COQ9O75208 318 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 RCBTB2O95199 551 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 LINC00032P0C843 101 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 UROSP10746 265 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 EPXP11678 715 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 KRT4P19013 534 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 GRK2P25098 689 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 TACR1P25103 407 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 DPP4P27487 766 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 NTSP30990 170 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 SRD5A2P31213 254 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 GABRA3P34903 492 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 CRHR1P34998 444 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 PEX19P40855 299 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 MC3RP41968 323 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 GSTM5P46439 218 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 PRKAG1P54619 331 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 GFRA1P56159 465 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 DNAJB13P59910 316 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 MRPS22P82650 360 aaKnown RBP6.08□□□□□ -1.44
SCAF11-211ENST00000547950 PSG6Q00889 435 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 STX5Q13190 355 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 GAB1Q13480 694 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 FLYWCH1Q4VC44 716 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 ANKRD26P1Q6NSI1 321 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 SPNS3Q6ZMD2 512 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 FRMD7Q6ZUT3 714 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 CHMP1BQ7LBR1 199 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 ZNF551Q7Z340 670 aaPredicted RBP6.08□□□□□ -1.44
SCAF11-211ENST00000547950 LUZP2Q86TE4 346 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 CDC20BQ86Y33 519 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 KIF18BQ86Y91 864 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 UBQLNLQ8IYU4 475 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 GCNT2Q8N0V5 402 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 CNPY4Q8N129 248 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 C4orf33Q8N1A6 199 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 OR4K17Q8NGC6 315 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 OR5M1Q8NGP8 315 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 MBD3L2Q8NHZ7 208 aaPredicted RBP6.08□□□□□ -1.44
SCAF11-211ENST00000547950 FAM76AQ8TAV0 307 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.08□□□□□ -1.44
SCAF11-211ENST00000547950 EPS8L3Q8TE67 593 aaKnown RBP6.08□□□□□ -1.44
SCAF11-211ENST00000547950 DUSP19Q8WTR2 217 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 FAM222BQ8WU58 562 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 ELP4Q96EB1 424 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 AMDHD1Q96NU7 426 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 TM9SF2Q99805 663 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 OR2B2Q9GZK3 357 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 STMN4Q9H169 189 aaPredicted RBP6.08□□□□□ -1.44
SCAF11-211ENST00000547950 GLIPR2Q9H4G4 154 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 MYNNQ9NPC7 610 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 RASSF1Q9NS23 344 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 DDX18Q9NVP1 670 aaKnown RBP6.08□□□□□ -1.44
SCAF11-211ENST00000547950 SIRT5Q9NXA8 310 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 TAS2R7Q9NYW3 318 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 FLRT3Q9NZU0 649 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 MED11Q9P086 117 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 PPP4R1LQ9P1A2 415 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 BAIAP2L1Q9UHR4 511 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 FOXD3Q9UJU5 478 aaPredicted RBP6.08□□□□□ -1.44
SCAF11-211ENST00000547950 CBLCQ9ULV8 474 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 C19orf53Q9UNZ5 99 aaPredicted RBP6.08□□□□□ -1.44
SCAF11-211ENST00000547950 WBP11Q9Y2W2 641 aaKnown RBP6.08□□□□□ -1.44
SCAF11-211ENST00000547950 WIF1Q9Y5W5 379 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 PTGDR2Q9Y5Y4 395 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 PCNX1Q96RV3 2341 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 PKDREJQ9NTG1 2253 aa6.08□□□□□ -1.44
SCAF11-211ENST00000547950 NCOA6Q14686 2063 aaPredicted RBP6.07□□□□□ -1.44
SCAF11-211ENST00000547950 A0A087WV62 115 aa6.07□□□□□ -1.44
SCAF11-211ENST00000547950 GXYLT2A0PJZ3 443 aa6.07□□□□□ -1.44
SCAF11-211ENST00000547950 A6NNC1 897 aa6.07□□□□□ -1.44
SCAF11-211ENST00000547950 H3BQF6 201 aa6.07□□□□□ -1.44
SCAF11-211ENST00000547950 AZIN1O14977 448 aa6.07□□□□□ -1.44
SCAF11-211ENST00000547950 RGS14O43566 566 aa6.07□□□□□ -1.44
SCAF11-211ENST00000547950 AKAP10O43572 662 aa6.07□□□□□ -1.44
SCAF11-211ENST00000547950 RSL1D1O76021 490 aaKnown RBP6.07□□□□□ -1.44
SCAF11-211ENST00000547950 IL18BPO95998 194 aa6.07□□□□□ -1.44
SCAF11-211ENST00000547950 ARAFP10398 606 aa6.07□□□□□ -1.44
SCAF11-211ENST00000547950 CD1EP15812 388 aa6.07□□□□□ -1.44
SCAF11-211ENST00000547950 HK1P19367 917 aa6.07□□□□□ -1.44
SCAF11-211ENST00000547950 CD33P20138 364 aa6.07□□□□□ -1.44
SCAF11-211ENST00000547950 CHMP24386 653 aa6.07□□□□□ -1.44
SCAF11-211ENST00000547950 EVI2BP34910 448 aa6.07□□□□□ -1.44
SCAF11-211ENST00000547950 CPA2P48052 419 aa6.07□□□□□ -1.44
SCAF11-211ENST00000547950 CLK3P49761 638 aaKnown RBP6.07□□□□□ -1.44
SCAF11-211ENST00000547950 LHX2P50458 406 aa6.07□□□□□ -1.44
SCAF11-211ENST00000547950 GAS1P54826 345 aa6.07□□□□□ -1.44
SCAF11-211ENST00000547950 DSCR4P56555 118 aaPredicted RBP6.07□□□□□ -1.44
SCAF11-211ENST00000547950 NAA20P61599 178 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms