RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 ACTR1AP61163 376 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 PHEXP78562 749 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 NFATC2Q13469 925 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 RFTN2Q52LD8 501 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-222ENST00000545308 STPG1Q5TH74 334 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 NCR3LG1Q68D85 454 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 STEAP1BQ6NZ63 245 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 SLC39A4Q6P5W5 647 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 CASC1Q6TDU7 716 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 Q6ZRP5 223 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 ASRGL1Q7L266 308 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 LHFPL4Q7Z7J7 247 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 CENPLQ8N0S6 344 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-222ENST00000545308 LINC00518Q8N0U6 118 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 LSMEM2Q8N112 164 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 ARFGAP2Q8N6H7 521 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 STKLD1Q8NE28 680 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 OR9Q2Q8NGE9 314 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 OR52M1Q8NGK5 317 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 OR10T2Q8NGX3 314 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 OR6S1Q8NH40 331 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 RDH11Q8TC12 318 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 TCP11Q8WWU5 503 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 N4BP2L2Q92802 583 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-222ENST00000545308 C4orf36Q96KX1 117 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 INPP4AQ96PE3 977 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-222ENST00000545308 GPA33Q99795 319 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 OVOL2Q9BRP0 275 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 RAB11FIP5Q9BXF6 653 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 PINK1Q9BXM7 581 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 LRRCC1Q9C099 1032 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 HOXD1Q9GZZ0 328 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 TSPY26PQ9H489 355 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 RMND5AQ9H871 391 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 UBE2TQ9NPD8 197 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-222ENST00000545308 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.47□□□□□ -1.85
SNHG1-222ENST00000545308 EXTL2Q9UBQ6 330 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 ERRFI1Q9UJM3 462 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-222ENST00000545308 ZNF490Q9ULM2 529 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-222ENST00000545308 PPP1R3CQ9UQK1 317 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 TCF19Q9Y242 345 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 PYGO1Q9Y3Y4 419 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 WIPI2Q9Y4P8 454 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 SCN5AQ14524 2016 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 CDK5RAP2Q96SN8 1893 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 TRANK1O15050 2925 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 PHIPQ8WWQ0 1821 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 DOCK1Q14185 1865 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 SYNJ2BP-COX16A0A087WUM0 186 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 LOC390937A0A1W2PQ73 354 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 MEI4A8MW99 385 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 E9PMD0 336 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 SGK494L7N484 410 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 MCF2LO15068 1137 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 MAPK13O15264 365 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 TSPAN2O60636 221 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 MAGEC1O60732 1142 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 CEACAM4O75871 244 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 IDH1O75874 414 aaKnown RBP3.46□□□□□ -1.86
SNHG1-222ENST00000545308 NDUFA7O95182 113 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 CLDN1O95832 211 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 TIMP1P01033 207 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 IGLV2-11P01706 119 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 IGHEP01854 428 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 ASNSP08243 561 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 GNB3P16520 340 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 PAX7P23759 505 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 DPP4P27487 766 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 DLSTP36957 453 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 ID1P41134 155 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 NDST1P52848 882 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 TCP10Q12799 353 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 SLC17A1Q14916 467 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 TRIP10Q15642 601 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 ACSF3Q4G176 576 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-222ENST00000545308 ASPHD2Q6ICH7 369 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 APOBEC3HQ6NTF7 200 aaKnown RBP3.46□□□□□ -1.86
SNHG1-222ENST00000545308 GSG1LQ6UXU4 331 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 DPY19L2P2Q6ZN68 376 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 Q6ZSR9 355 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 PAQR9Q6ZVX9 377 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 GOLGA7Q7Z5G4 137 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 GPR142Q7Z601 462 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 ZDHHC21Q8IVQ6 265 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 RAB42Q8N4Z0 105 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 GVQW1Q8N7I0 195 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 MLKLQ8NB16 471 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 CHDHQ8NE62 594 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-222ENST00000545308 WDR36Q8NI36 951 aaKnown RBP3.46□□□□□ -1.86
SNHG1-222ENST00000545308 TMEM190Q8WZ59 177 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 DNASE2BQ8WZ79 361 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 NR4A3Q92570 626 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 SLC25A36Q96CQ1 311 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 CNRIP1Q96F85 164 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-222ENST00000545308 UHRF2Q96PU4 802 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 ZNF300Q96RE9 604 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-222ENST00000545308 KRT12Q99456 494 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 WRAP53Q9BUR4 548 aaKnown RBP3.46□□□□□ -1.86
SNHG1-222ENST00000545308 RBM24Q9BX46 236 aaKnown RBP3.46□□□□□ -1.86
SNHG1-222ENST00000545308 WDR76Q9H967 626 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms