RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 ZFP69Q49AA0 526 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 ZNF628Q5EBL2 1059 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 SLC35F1Q5T1Q4 408 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 TRIQKQ629K1 86 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 MFSD12Q6NUT3 480 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 FBXO46Q6PJ61 603 aaPredicted RBP12.21□□□□□ -0.46
CPSF7-223ENST00000544669 ABHD13Q7L211 337 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 KIF18BQ86Y91 864 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 LAX1Q8IWV1 398 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 CAMKVQ8NCB2 501 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 OR6F1Q8NGZ6 308 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 BRIX1Q8TDN6 353 aaKnown RBP12.21□□□□□ -0.46
CPSF7-223ENST00000544669 BADQ92934 168 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 KCTD12Q96CX2 325 aaKnown RBP12.21□□□□□ -0.46
CPSF7-223ENST00000544669 ZC3HAV1LQ96H79 300 aaKnown RBP12.21□□□□□ -0.46
CPSF7-223ENST00000544669 HS6ST2Q96MM7 605 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 PHOX2BQ99453 314 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 RSPO3Q9BXY4 272 aaPredicted RBP12.21□□□□□ -0.46
CPSF7-223ENST00000544669 XKR8Q9H6D3 395 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 TNFRSF10DQ9UBN6 386 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 MUTYHQ9UIF7 546 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 PCOLCE2Q9UKZ9 415 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 WDR45Q9Y484 360 aa12.21□□□□□ -0.46
CPSF7-223ENST00000544669 NOTCH4Q99466 2003 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 KIAA1549LQ6ZVL6 1849 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 A0A087WV62 115 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 A0A1W2PP55 124 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 TRAPPC13A5PLN9 417 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 FAM86C2PA6NEL3 165 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 GLOD5A6NK44 160 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 GUSBP08236 651 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 CHRM5P08912 532 aaPredicted RBP12.2□□□□□ -0.46
CPSF7-223ENST00000544669 SPNP16150 400 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 CPN2P22792 545 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 CERS1P27544 350 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 HLA-DMAP28067 261 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 MC3RP41968 323 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 DGKEP52429 567 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 RAB25P57735 213 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 BTN3A2P78410 334 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 QPRTQ15274 297 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 ZNF79Q15937 498 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 PUS10Q3MIT2 529 aaKnown RBP12.2□□□□□ -0.46
CPSF7-223ENST00000544669 PYDC2Q56P42 97 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 HACD4Q5VWC8 232 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 ZNF620Q6ZNG0 422 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 USP53Q70EK8 1073 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 PAQR7Q86WK9 346 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 GPALPP1Q8IXQ4 340 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 RDH10Q8IZV5 341 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 OR2L13Q8N349 312 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 ENKURQ8TC29 256 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 GATAD2BQ8WXI9 593 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 C16orf58Q96GQ5 468 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 FRMD6Q96NE9 622 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 YIPF4Q9BSR8 244 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 TRAF4Q9BUZ4 470 aaPredicted RBP12.2□□□□□ -0.46
CPSF7-223ENST00000544669 KATNB1Q9BVA0 655 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 PIGUQ9H490 435 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 EGLN3Q9H6Z9 239 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 LYRM4Q9HD34 91 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 SEMA4GQ9NTN9 838 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 MOSPD1Q9UJG1 213 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 ZNF443Q9Y2A4 671 aaPredicted RBP12.2□□□□□ -0.46
CPSF7-223ENST00000544669 ALPK3Q96L96 1907 aa12.2□□□□□ -0.46
CPSF7-223ENST00000544669 A0A1W2PQ09 198 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 A0A1W2PQU0 124 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 MEIOCA2RUB1 952 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 CPSF4LA6NMK7 179 aaKnown RBP12.19□□□□□ -0.46
CPSF7-223ENST00000544669 FAM25AB3EWG3 89 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 FAM25CB3EWG5 89 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 FAM25GB3EWG6 89 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 PLD2O14939 933 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 KLF4O43474 513 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 TNFSF14O43557 240 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 HLA-DQB1P01920 261 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 MSL3P1P0C860 447 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 LIMS3P0CW19 117 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 LIMS4P0CW20 117 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 MLLT3P42568 568 aaPredicted RBP12.19□□□□□ -0.46
CPSF7-223ENST00000544669 INPP1P49441 399 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 C18orf63Q68DL7 685 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 ACBD7Q8N6N7 88 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 OR9A2Q8NGT5 310 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 RSC1A1Q92681 617 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 SLC35B4Q969S0 331 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 FAM46AQ96IP4 442 aaKnown RBP12.19□□□□□ -0.46
CPSF7-223ENST00000544669 CD180Q99467 661 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 STACQ99469 402 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 GPA33Q99795 319 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 WFDC6Q9BQY6 131 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 AICDAQ9GZX7 198 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 DUSP22Q9NRW4 184 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 ZFR2Q9UPR6 939 aaKnown RBP12.19□□□□□ -0.46
CPSF7-223ENST00000544669 NCKAP1Q9Y2A7 1128 aa12.19□□□□□ -0.46
CPSF7-223ENST00000544669 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 SLC22A31A6NKX4 558 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 STX11O75558 287 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 APBB3O95704 486 aa12.18□□□□□ -0.46
CPSF7-223ENST00000544669 AVPR1BP47901 424 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms