RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 MVDP53602 400 aa12.52□□□□□ -0.41
SP140-213ENST00000543928 PNLIPRP2P54317 469 aa12.52□□□□□ -0.41
SP140-213ENST00000543928 PSMD4P55036 377 aaKnown RBP12.52□□□□□ -0.41
SP140-213ENST00000543928 EFR3AQ14156 821 aa12.52□□□□□ -0.41
SP140-213ENST00000543928 SOWAHCQ53LP3 525 aaPredicted RBP12.52□□□□□ -0.41
SP140-213ENST00000543928 CCNJQ5T5M9 372 aa12.52□□□□□ -0.41
SP140-213ENST00000543928 PRAMEF20Q5VT98 475 aa12.52□□□□□ -0.41
SP140-213ENST00000543928 SLC22A10Q63ZE4 541 aa12.52□□□□□ -0.41
SP140-213ENST00000543928 FIGNL1Q6PIW4 674 aa12.52□□□□□ -0.41
SP140-213ENST00000543928 NUP54Q7Z3B4 507 aa12.52□□□□□ -0.41
SP140-213ENST00000543928 GALNTL5Q7Z4T8 443 aa12.52□□□□□ -0.41
SP140-213ENST00000543928 GALNT10Q86SR1 603 aa12.52□□□□□ -0.41
SP140-213ENST00000543928 Q8NA96 180 aa12.52□□□□□ -0.41
SP140-213ENST00000543928 TMEM178AQ8NBL3 297 aa12.52□□□□□ -0.41
SP140-213ENST00000543928 SPPL2AQ8TCT8 520 aa12.52□□□□□ -0.41
SP140-213ENST00000543928 PAQR8Q8TEZ7 354 aa12.52□□□□□ -0.41
SP140-213ENST00000543928 XAGE5Q8WWM1 108 aa12.52□□□□□ -0.41
SP140-213ENST00000543928 RAB8BQ92930 207 aa12.52□□□□□ -0.41
SP140-213ENST00000543928 HGDQ93099 445 aa12.52□□□□□ -0.41
SP140-213ENST00000543928 NODALQ96S42 347 aa12.52□□□□□ -0.41
SP140-213ENST00000543928 SACM1LQ9NTJ5 587 aa12.52□□□□□ -0.41
SP140-213ENST00000543928 EXD2Q9NVH0 621 aa12.52□□□□□ -0.41
SP140-213ENST00000543928 KLF13Q9Y2Y9 288 aaPredicted RBP12.52□□□□□ -0.41
SP140-213ENST00000543928 PCDHGB6Q9Y5F9 930 aa12.52□□□□□ -0.41
SP140-213ENST00000543928 PCDHGA10Q9Y5H3 936 aa12.52□□□□□ -0.41
SP140-213ENST00000543928 COL6A6A6NMZ7 2263 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 G3V3Y1 287 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 HMGN4O00479 90 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 AGR2O95994 175 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 P04436 131 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 PPIBP23284 216 aaKnown RBP12.51□□□□□ -0.41
SP140-213ENST00000543928 CRATP43155 626 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 GPR85P60893 370 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 RPP38P78345 283 aaKnown RBP12.51□□□□□ -0.41
SP140-213ENST00000543928 TXNL4AP83876 142 aaKnown RBP12.51□□□□□ -0.41
SP140-213ENST00000543928 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.51□□□□□ -0.41
SP140-213ENST00000543928 TRMT5Q32P41 509 aaKnown RBP12.51□□□□□ -0.41
SP140-213ENST00000543928 RUNDC3AQ59EK9 446 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 DCST2Q5T1A1 773 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 ATAD3BQ5T9A4 648 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 BICRALQ6AI39 1079 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 C16orf62Q7Z3J2 963 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 FBXW8Q8N3Y1 598 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 PCYOX1LQ8NBM8 494 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 OR52N2Q8NGI0 321 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 FAM110BQ8TC76 370 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 RCN3Q96D15 328 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 TMCO6Q96DC7 493 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 CMTM5Q96DZ9 223 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 SECISBP2Q96T21 854 aaKnown RBP12.51□□□□□ -0.41
SP140-213ENST00000543928 CGREF1Q99674 301 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 G6PC3Q9BUM1 346 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 RAD21L1Q9H4I0 556 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 IKZF5Q9H5V7 419 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 DEPPQ9NTK1 212 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 FBXO34Q9NWN3 711 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 CNIH4Q9P003 139 aa12.51□□□□□ -0.41
SP140-213ENST00000543928 CNOT11Q9UKZ1 510 aaKnown RBP12.51□□□□□ -0.41
SP140-213ENST00000543928 EML6Q6ZMW3 1958 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 A0A0G2JMM0 328 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 A0A1W2PPB8 328 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 A0A1W2PRS3 328 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 KIR3DP1A8MWS1 328 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 EVPLLA8MZ36 301 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 AIM2O14862 343 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 PEX1O43933 1283 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 HS6ST1O60243 411 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 ICOSLGO75144 302 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 SORBS2O94875 1100 aaKnown RBP12.5□□□□□ -0.41
SP140-213ENST00000543928 AK1P00568 194 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 PRB1P04280 392 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 ETFAP13804 333 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 ATP6V1C1P21283 382 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 CNR1P21554 472 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 PRDX6P30041 224 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 MAGEA8P43361 318 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 DNASE1L1P49184 302 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 DSTNP60981 165 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 FADDQ13158 208 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 CAPRIN1Q14444 709 aaKnown RBP12.5□□□□□ -0.41
SP140-213ENST00000543928 RGNQ15493 299 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 ARHGAP11BQ3KRB8 267 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 HEPHL1Q6MZM0 1159 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 RPUSD3Q6P087 351 aaKnown RBP12.5□□□□□ -0.41
SP140-213ENST00000543928 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.5□□□□□ -0.41
SP140-213ENST00000543928 ZAR1Q86SH2 424 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 SULF2Q8IWU5 870 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 FITM2Q8N6M3 262 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 CHDHQ8NE62 594 aaPredicted RBP12.5□□□□□ -0.41
SP140-213ENST00000543928 LRRC58Q96CX6 371 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 ANKRD27Q96NW4 1050 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 SDF2Q99470 211 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 CPPED1Q9BRF8 314 aaPredicted RBP12.5□□□□□ -0.41
SP140-213ENST00000543928 SLC39A3Q9BRY0 314 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 TRIM8Q9BZR9 551 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 METTL7AQ9H8H3 244 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 FLRT3Q9NZU0 649 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 ANAPC2Q9UJX6 822 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 CORO2BQ9UQ03 480 aa12.5□□□□□ -0.41
SP140-213ENST00000543928 GMEB1Q9Y692 573 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms