RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, human

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX55-209	ENST00000542286	SETD6	Q8TBK2	473 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	SLC7A6	Q92536	515 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	SLC9A6	Q92581	669 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	SNAPC3	Q92966	411 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	LRR1	Q96L50	414 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	STARD5	Q9NSY2	213 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	SEMA4G	Q9NTN9	838 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	MUTYH	Q9UIF7	546 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	ENTPD4	Q9Y227	616 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	WDFY3	Q8IZQ1	3526 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286		A0A087WUU8	490 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	LOC105369274	A0A096LPK9	316 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	LOC102723532	A0A0G2JNH3	316 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	FAAH	O00519	579 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	PIP5K1C	O60331	668 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	CTSV	O60911	334 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	RASGRP1	O95267	797 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	LAMP2	P13473	410 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	F3	P13726	295 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	POLR2C	P19387	275 aa	Predicted RBP	13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	PPP2R1B	P30154	601 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	CD83	Q01151	205 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	ILK	Q13418	452 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	CDON	Q4KMG0	1287 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	ZNF311	Q5JNZ3	666 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	AMIGO1	Q86WK6	493 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	NKAIN4	Q8IVV8	208 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	OR4N4	Q8N0Y3	316 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	FAM109A	Q8N4B1	249 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	OR7G2	Q8NG99	324 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	FUZ	Q9BT04	418 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	FAIM2	Q9BWQ8	316 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	TRPV4	Q9HBA0	871 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	SLC25A19	Q9HC21	320 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	CES1P1	Q9UKY3	287 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	AP1M2	Q9Y6Q5	423 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	DMD	P11532	3685 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286	TICRR	Q7Z2Z1	1910 aa		13.84	□□□□□ -0.19
DDX55-209	ENST00000542286		A0A1W2PQ72	361 aa		13.83	□□□□□ -0.19
DDX55-209	ENST00000542286	CACNB4	O00305	520 aa	Predicted RBP	13.83	□□□□□ -0.19
DDX55-209	ENST00000542286	PPP1CA	P62136	330 aa		13.83	□□□□□ -0.19
DDX55-209	ENST00000542286	HYAL1	Q12794	435 aa		13.83	□□□□□ -0.19
DDX55-209	ENST00000542286	SLC48A1	Q6P1K1	146 aa		13.83	□□□□□ -0.19
DDX55-209	ENST00000542286	KIAA1324	Q6UXG2	1013 aa	Known RBP	13.83	□□□□□ -0.19
DDX55-209	ENST00000542286	MORN4	Q8NDC4	146 aa		13.83	□□□□□ -0.19
DDX55-209	ENST00000542286	ZFPM2	Q8WW38	1151 aa		13.83	□□□□□ -0.19
DDX55-209	ENST00000542286	GON7	Q9BXV9	100 aa		13.83	□□□□□ -0.19
DDX55-209	ENST00000542286	PRRG3	Q9BZD7	231 aa		13.83	□□□□□ -0.19
DDX55-209	ENST00000542286	SLC38A1	Q9H2H9	487 aa		13.83	□□□□□ -0.19
DDX55-209	ENST00000542286	GSAP	A4D1B5	854 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	MEN1	O00255	615 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	CDK2AP1	O14519	115 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	RGS5	O15539	181 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	PROM1	O43490	865 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	PLRG1	O43660	514 aa	Known RBP	13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	PDE9A	O76083	593 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	CTSB	P07858	339 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	CLEC2L	P0C7M8	214 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	TRAPPC2	P0DI81	140 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	TRAPPC2B	P0DI82	140 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	M6PR	P20645	277 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	AZGP1	P25311	298 aa	Known RBP	13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	RPS19	P39019	145 aa	Known RBP	13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	ETV5	P41161	510 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	GPR4	P46093	362 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	ETV1	P50549	477 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	ZMAT1	Q5H9K5	638 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	FAAH2	Q6GMR7	532 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	MRM1	Q6IN84	353 aa	Known RBP	13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	OR5T3	Q8NGG3	340 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	CDS1	Q92903	461 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	TIMM29	Q9BSF4	260 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	TCEAL2	Q9H3H9	227 aa	Predicted RBP	13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	SNTG1	Q9NSN8	517 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	FBXO34	Q9NWN3	711 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	KCNN3	Q9UGI6	736 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	MGAT4B	Q9UQ53	548 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	TRAPPC4	Q9Y296	219 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	EFCAB10	A6NFE3	127 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	LDB3	O75112	727 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	CELA2B	P08218	269 aa	Predicted RBP	13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	RFX3	P48380	749 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	KHK	P50053	298 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	LIMK1	P53667	647 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	TAS2R41	P59536	307 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	ENPP2	Q13822	863 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	SNAPC1	Q16533	368 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	BAK1	Q16611	211 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	PRRT3	Q5FWE3	981 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	KRT73	Q86Y46	540 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	GRAMD2A	Q8IUY3	354 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	TTC9	Q92623	222 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	OTULIN	Q96BN8	352 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	ELP4	Q96EB1	424 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	GAS2L1	Q99501	681 aa	Predicted RBP	13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	CDCA4	Q9BXL8	241 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	BARHL1	Q9BZE3	327 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	TAS2R7	Q9NYW3	318 aa		13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	13.83	□□□□□ -0.2
DDX55-209	ENST00000542286	FANCM	Q8IYD8	2048 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms