RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 OR4D9Q8NGE8 314 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 ADAMTS18Q8TE60 1221 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 PTPMT1Q8WUK0 201 aaPredicted RBP11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 RASSF5Q8WWW0 418 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 RBM18Q96H35 190 aaKnown RBP11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 PTCHD1Q96NR3 888 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 OR6C1Q96RD1 312 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 LMF1Q96S06 567 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 PHOX2BQ99453 314 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 STACQ99469 402 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 NDC1Q9BTX1 674 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 LMF2Q9BU23 707 aaKnown RBP11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 ITPAQ9BY32 194 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 ZNF304Q9HCX3 659 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 DUSP22Q9NRW4 184 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 OCIAD1Q9NX40 245 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 SIDT1Q9NXL6 827 aaKnown RBP11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 SERTAD3Q9UJW9 196 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 HEMK1Q9Y5R4 338 aaPredicted RBP11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 ASCC3Q8N3C0 2202 aaKnown RBP11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 TRIM64A6NGJ6 449 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 AGAP5A6NIR3 686 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 YKT6O15498 198 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 KIAA0513O60268 411 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 SLITRK5O94991 958 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 OR6B1O95007 311 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 H1F0P07305 194 aaKnown RBP11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 PRG2P13727 222 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 RFX3P48380 749 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 EEF1A1P68104 462 aaKnown RBP11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 DAB2P98082 770 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 FUT7Q11130 342 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 ZNF528Q3MIS6 628 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 MINDY4Q4G0A6 757 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 COLEC12Q5KU26 742 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 MFSD4BQ5TF39 518 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 ARHGAP40Q5TG30 622 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 PWWP2BQ6NUJ5 590 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 NIPAL1Q6NVV3 410 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 SATL1Q86VE3 508 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 SLITRK4Q8IW52 837 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 C8orf59Q8N0T1 100 aaPredicted RBP11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 TSPAN14Q8NG11 270 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 C16orf52Q8NHV5 167 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 CNIH3Q8TBE1 160 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 SLC7A13Q8TCU3 470 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 SPATA5L1Q9BVQ7 753 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 GABARAPL3Q9BY60 117 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 SAP130Q9H0E3 1048 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 CLK4Q9HAZ1 481 aaKnown RBP11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 PNO1Q9NRX1 252 aaKnown RBP11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 CALML5Q9NZT1 146 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 NDRG4Q9ULP0 352 aaKnown RBP11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 WDR87Q6ZQQ6 2873 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 A0A1B0GX78 115 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 BLACEA4D250 179 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 CPSF4LA6NMK7 179 aaKnown RBP11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 M0R129 80 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 SYT5O00445 386 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 TOX3O15405 576 aaPredicted RBP11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 COQ9O75208 318 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 UGT2B17O75795 530 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 AGR2O95994 175 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 CT45A8P0DMV1 189 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 CT45A9P0DMV2 189 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 PTNP21246 168 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 PRKAR1BP31321 381 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 ZNF136P52737 540 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 POU6F2P78424 691 aaPredicted RBP11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 HPCAP84074 193 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 PIGFQ07326 219 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 EPS8Q12929 822 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 NPRL3Q12980 569 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 RFX4Q33E94 735 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 CT45A2Q5DJT8 189 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 LCN10Q6JVE6 187 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 ZCCHC12Q6PEW1 402 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 PODNL1Q6PEZ8 512 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 KLHL17Q6TDP4 642 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 ZNF619Q8N2I2 560 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 FBLIM1Q8WUP2 373 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 CLIP3Q96DZ5 547 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 MVB12AQ96EY5 273 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 PITX2Q99697 317 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 GPA33Q99795 319 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 PSD2Q9BQI7 771 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 MRPS26Q9BYN8 205 aaKnown RBP11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 OR10A5Q9H207 317 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 MTHFD2LQ9H903 347 aaPredicted RBP11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 PAPOLBQ9NRJ5 636 aaKnown RBP11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 SEMA4GQ9NTN9 838 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 SATB2Q9UPW6 733 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 HCN4Q9Y3Q4 1203 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 ORC6Q9Y5N6 252 aa11.38□□□□□ -0.59
AP003559.1-201ENST00000540906 C17orf105B2RV13 164 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 GALR2O43603 387 aaPredicted RBP11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 BRINP1O60477 761 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 DDAH2O95865 285 aa11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 RPP38P78345 283 aaKnown RBP11.37□□□□□ -0.59
AP003559.1-201ENST00000540906 KCTD21Q4G0X4 260 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms