RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 A0A0B4J203 849 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 MAN2B1O00754 1011 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 SLC9A3R1O14745 358 aaPredicted RBP13.23□□□□□ -0.29
INO80E-203ENST00000540562 GMFGO60234 142 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 PAHP00439 452 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 HIST1H1TP22492 207 aaPredicted RBP13.23□□□□□ -0.29
INO80E-203ENST00000540562 CXCR2P25025 360 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 KIR2DL3P43628 341 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 TFF2Q03403 129 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 PRDX1Q06830 199 aaKnown RBP13.23□□□□□ -0.29
INO80E-203ENST00000540562 SCN1BQ07699 218 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 GXYLT1Q4G148 440 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 TRIQKQ629K1 86 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 ZNF544Q6NX49 715 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 PRSS41Q7RTY9 318 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 Q8N402 240 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 MORN4Q8NDC4 146 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 PROKR2Q8NFJ6 384 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 OR10H4Q8NGA5 316 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 PFN4Q8NHR9 129 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 NEIL3Q8TAT5 605 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 ADAMTS15Q8TE58 950 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 PCNPQ8WW12 178 aaKnown RBP13.23□□□□□ -0.29
INO80E-203ENST00000540562 ORAI1Q96D31 301 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 ZNF514Q96K75 400 aaPredicted RBP13.23□□□□□ -0.29
INO80E-203ENST00000540562 HCAR1Q9BXC0 346 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 HDHD2Q9H0R4 259 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 USP36Q9P275 1121 aaKnown RBP13.23□□□□□ -0.29
INO80E-203ENST00000540562 SNX7Q9UNH6 387 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 ZFR2Q9UPR6 939 aaKnown RBP13.23□□□□□ -0.29
INO80E-203ENST00000540562 TDRD6O60522 2096 aaKnown RBP13.23□□□□□ -0.29
INO80E-203ENST00000540562 LRRC72A6NJI9 287 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 PSMD9O00233 223 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 SLC30A4O14863 429 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 CDC123O75794 336 aaPredicted RBP13.23□□□□□ -0.29
INO80E-203ENST00000540562 LIMS3P0CW19 117 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 LIMS4P0CW20 117 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 SLC2A2P11168 524 aaPredicted RBP13.23□□□□□ -0.29
INO80E-203ENST00000540562 TBXA2RP21731 343 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 MYL9P24844 172 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 ACVR1BP36896 505 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 SLC9A3P48764 834 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 PXNP49023 591 aaPredicted RBP13.23□□□□□ -0.29
INO80E-203ENST00000540562 SNRPGP62308 76 aaKnown RBP13.23□□□□□ -0.29
INO80E-203ENST00000540562 REEP5Q00765 189 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 SLC3A1Q07837 685 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 HYAL2Q12891 473 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 DDI2Q5TDH0 399 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 ARL9Q6T311 187 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 VASH1Q7L8A9 365 aaPredicted RBP13.23□□□□□ -0.29
INO80E-203ENST00000540562 OR13C5Q8NGS8 318 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 UFD1Q92890 307 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 TSACCQ96A04 125 aaPredicted RBP13.23□□□□□ -0.29
INO80E-203ENST00000540562 SLC25A46Q96AG3 418 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 TMCO6Q96DC7 493 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 MS4A6EQ96DS6 147 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 LRIG1Q96JA1 1093 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 TOX2Q96NM4 488 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 B3GAT2Q9NPZ5 323 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 MAT2BQ9NZL9 334 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 ICKQ9UPZ9 632 aa13.23□□□□□ -0.29
INO80E-203ENST00000540562 C1QTNF3-AMACRE9PGA6 284 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 ALPPP05187 535 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 ZNF888P0CJ79 500 aaPredicted RBP13.22□□□□□ -0.29
INO80E-203ENST00000540562 LIMK1P53667 647 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 SGCGQ13326 291 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 GPR50Q13585 617 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 KRT74Q7RTS7 529 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 ETFBKMTQ8IXQ9 262 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 C19orf18Q8NEA5 215 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 ST6GAL2Q96JF0 529 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 MENTQ9BUN1 341 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 MKRN2Q9H000 416 aaKnown RBP13.22□□□□□ -0.29
INO80E-203ENST00000540562 ANKHQ9HCJ1 492 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 POLMQ9NP87 494 aaPredicted RBP13.22□□□□□ -0.29
INO80E-203ENST00000540562 GIMAP4Q9NUV9 329 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 PTGFRNQ9P2B2 879 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 GPR34Q9UPC5 381 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 NDUFB5O43674 189 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 VEGFDO43915 354 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 GCGRP47871 477 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 KHKP50053 298 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 HNRNPFP52597 415 aaKnown RBP13.22□□□□□ -0.29
INO80E-203ENST00000540562 OR10A3P58181 314 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 MLLT11Q13015 90 aaPredicted RBP13.22□□□□□ -0.29
INO80E-203ENST00000540562 TRMT12Q53H54 448 aaKnown RBP13.22□□□□□ -0.29
INO80E-203ENST00000540562 Q5BKY6 102 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 SIRT6Q8N6T7 355 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 OR7G2Q8NG99 324 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 FAIM2Q9BWQ8 316 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 C20orf141Q9NUB4 165 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 H2AFY2Q9P0M6 372 aaPredicted RBP13.22□□□□□ -0.29
INO80E-203ENST00000540562 CHST2Q9Y4C5 530 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 TP53BP1Q12888 1972 aaPredicted RBP13.22□□□□□ -0.29
INO80E-203ENST00000540562 CELSR3Q9NYQ7 3312 aa13.22□□□□□ -0.29
INO80E-203ENST00000540562 TRAV27A0A087WT01 109 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 A0A0A6YYD5 115 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 POM121BA6NF01 834 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 PEX12O00623 359 aa13.21□□□□□ -0.29
INO80E-203ENST00000540562 UBXN7O94888 489 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms