RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 GALNT1Q10472 559 aaPredicted RBP6.71□□□□□ -1.33
MSH6-209ENST00000538136 TAF11Q15544 211 aa6.71□□□□□ -1.33
MSH6-209ENST00000538136 DUSP5Q16690 384 aa6.71□□□□□ -1.33
MSH6-209ENST00000538136 UGT8Q16880 541 aa6.71□□□□□ -1.33
MSH6-209ENST00000538136 ODF4Q2M2E3 257 aa6.71□□□□□ -1.33
MSH6-209ENST00000538136 ZNF595Q8IYB9 648 aa6.71□□□□□ -1.33
MSH6-209ENST00000538136 SAMD14Q8IZD0 417 aaPredicted RBP6.71□□□□□ -1.33
MSH6-209ENST00000538136 OR6N1Q8NGY5 312 aa6.71□□□□□ -1.33
MSH6-209ENST00000538136 TMCO6Q96DC7 493 aa6.71□□□□□ -1.33
MSH6-209ENST00000538136 SLC41A2Q96JW4 573 aa6.71□□□□□ -1.33
MSH6-209ENST00000538136 TMEM109Q9BVC6 243 aa6.71□□□□□ -1.33
MSH6-209ENST00000538136 TIMMDC1Q9NPL8 285 aa6.71□□□□□ -1.33
MSH6-209ENST00000538136 AGPAT4Q9NRZ5 378 aa6.71□□□□□ -1.33
MSH6-209ENST00000538136 ING3Q9NXR8 418 aa6.71□□□□□ -1.33
MSH6-209ENST00000538136 B4GALT7Q9UBV7 327 aa6.71□□□□□ -1.33
MSH6-209ENST00000538136 MCM8Q9UJA3 840 aa6.71□□□□□ -1.33
MSH6-209ENST00000538136 PCDHA9Q9Y5H5 950 aa6.71□□□□□ -1.33
MSH6-209ENST00000538136 KCNE3Q9Y6H6 103 aa6.71□□□□□ -1.33
MSH6-209ENST00000538136 PATJQ8NI35 1801 aa6.71□□□□□ -1.33
MSH6-209ENST00000538136 RALGAPA2Q2PPJ7 1873 aa6.71□□□□□ -1.33
MSH6-209ENST00000538136 ANKRD36A6QL64 1941 aa6.71□□□□□ -1.33
MSH6-209ENST00000538136 ELOVL7A1L3X0 281 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 TM4SF5O14894 197 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 MAN1A2O60476 641 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 APOL3O95236 402 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 CD247P20963 164 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 PIN1Q13526 163 aaPredicted RBP6.71□□□□□ -1.34
MSH6-209ENST00000538136 TRA2AQ13595 282 aaKnown RBP eCLIP6.71□□□□□ -1.346e-7■■■■■ 32.2
MSH6-209ENST00000538136 TERF2Q15554 542 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 GLYR1Q49A26 553 aaPredicted RBP6.71□□□□□ -1.34
MSH6-209ENST00000538136 EEF1A1P5Q5VTE0 462 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 SCUBE1Q8IWY4 988 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 B3GNT7Q8NFL0 401 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 DHRS4Q9BTZ2 278 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 OR11A1Q9GZK7 315 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 OR51V1Q9H2C8 321 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 RIBC2Q9H4K1 309 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 USP24Q9UPU5 2620 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 DOCK10Q96BY6 2186 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 LAMA5O15230 3695 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 PRKD3O94806 890 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 TDGF1P13385 188 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 BSGP35613 385 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 IST1P53990 364 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 TMPRSS3P57727 454 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 DNAJB13P59910 316 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 RCAN2Q14206 197 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 NADK2Q4G0N4 442 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 ZNF425Q6IV72 752 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 TMEM214Q6NUQ4 689 aaKnown RBP6.71□□□□□ -1.34
MSH6-209ENST00000538136 OPN5Q6U736 354 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 EPGNQ6UW88 154 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 OR4C3Q8NH37 302 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 OR52P1PQ8NH57 321 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 PROKR1Q8TCW9 393 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 INTS12Q96CB8 462 aaKnown RBP6.71□□□□□ -1.34
MSH6-209ENST00000538136 LRRC58Q96CX6 371 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 L3HYPDHQ96EM0 354 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 SLC6A15Q9H2J7 730 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 TAS2R10Q9NYW0 307 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 ITPR3Q14573 2671 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 DUXAA6NLW8 204 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 LRRN3E7EW58 273 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 ITGB2P05107 769 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 GP1BAP07359 652 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 ADRB1P08588 477 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 RPSAP08865 295 aaKnown RBP6.71□□□□□ -1.34
MSH6-209ENST00000538136 ADORA3P0DMS8 318 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 GP1BBP13224 206 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 ICAM2P13598 275 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 POU3F2P20265 443 aaPredicted RBP6.71□□□□□ -1.34
MSH6-209ENST00000538136 GPR143P51810 404 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 SLC26A5P58743 744 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 RNF4P78317 190 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 FAM53BQ14153 422 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 ZNF766Q5HY98 468 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 GARNL3Q5VVW2 1013 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 SLC48A1Q6P1K1 146 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 OR1J4Q8NGS1 313 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 MZB1Q8WU39 189 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 AMDHD1Q96NU7 426 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 MCHR1Q99705 422 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 CCT7Q99832 543 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 TRIM2Q9C040 744 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 KLHL4Q9C0H6 718 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 SPAG4Q9NPE6 437 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 SDHAF3Q9NRP4 125 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 H2AFY2Q9P0M6 372 aaPredicted RBP6.71□□□□□ -1.34
MSH6-209ENST00000538136 P2RX2Q9UBL9 471 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 CBLCQ9ULV8 474 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 DTX4Q9Y2E6 619 aa6.71□□□□□ -1.34
MSH6-209ENST00000538136 ATMQ13315 3056 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 FAM234BA2RU67 622 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 TGM1P22735 817 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 PSMA4P25789 261 aaKnown RBP6.7□□□□□ -1.34
MSH6-209ENST00000538136 KHKP50053 298 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 CDC20Q12834 499 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 SELPLGQ14242 412 aa6.7□□□□□ -1.34
MSH6-209ENST00000538136 ELAVL1Q15717 326 aaKnown RBP6.7□□□□□ -1.34
MSH6-209ENST00000538136 RUNDC3AQ59EK9 446 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms